DRSC/TRiP Functional Genomics Resources

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Protein Alignment bai and Tmed9

DIOPT Version :9

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_080487.2 Gene:Tmed9 / 67511 MGIID:1914761 Length:235 Species:Mus musculus


Alignment Length:215 Identity:58/215 - (26%)
Similarity:106/215 - (49%) Gaps:17/215 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AFIVCLLMACAWSSHAVMFKLSPNTQKCLKEDIQANQLVMGEFEVS-----------DVPGQIID 58
            ||::.|.:|...|  |:.|.:....:||..|:|....:|:|.:...           ..||..:.
Mouse    24 AFLLLLWLAARGS--ALYFHIGETEKKCFIEEIPDETMVIGNYRTQLYDKQREEYQPATPGLGMF 86

  Fly    59 YIARDTKGHILSQKEHITKGKFSFMSEVYDTYEICFIS---KVPAHQRGVIQEVSLLTKKGVETK 120
            ...:|.:..::..:::.::|:|:|.|.....::||..|   |......|::: |.|..:.|....
Mouse    87 VEVKDPEDKVILARQYGSEGRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLR-VHLDIQVGEHAN 150

  Fly   121 SYEGIGEASKLKPLEVDLKRLEDLSDSIVRDFVLMRKREEEMRDTNEKTNSRVLFFSIFSMCCLL 185
            .|..|....||..|::.:::|.:..:.|.::....|.|||..|.|:|.||.|||::||.....|:
Mouse   151 DYAEIAAKDKLSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILV 215

  Fly   186 GLATWQVLYLRRYFKAKKLI 205
            .:..||:.:|:.:|:||||:
Mouse   216 AIGVWQMRHLKSFFEAKKLV 235

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:279450 48/193 (25%)
Tmed9NP_080487.2 EMP24_GP25L 37..230 CDD:279450 48/193 (25%)
Required for interaction with STX17. /evidence=ECO:0000250 121..160 9/39 (23%)
COPI vesicle coat-binding. /evidence=ECO:0000255 228..235 4/6 (67%)