DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bai and Tmed7

DIOPT Version :10

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_079974.1 Gene:Tmed7 / 66676 MGIID:1913926 Length:224 Species:Mus musculus


Alignment Length:202 Identity:47/202 - (23%)
Similarity:78/202 - (38%) Gaps:19/202 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLMACAWSSHAVMFKLSPNTQKCLKEDIQANQLVMGEFEVSDVPGQIIDYIARDTKGHILSQKEH 74
            ||:........:.|:|..|.::|..|||........||:|.......:|....|..|.:|.::..
Mouse    26 LLLPAPSGGSEITFELPDNAKQCFYEDITQGTKCTLEFQVITGGHYDVDCRLEDPDGKVLYKEMK 90

  Fly    75 ITKGKFSFMSEVYDTYEICFISKVPAHQRGVIQEVSLLTKK--------GVETKSYEGIGEASKL 131
            .....|:|.:....||:.||.:           |.|..|.|        |.:...:......|.|
Mouse    91 KQYDSFTFTASRNGTYKFCFSN-----------EFSTFTHKTVYFDFQVGEDPPLFPSENRVSAL 144

  Fly   132 KPLEVDLKRLEDLSDSIVRDFVLMRKREEEMRDTNEKTNSRVLFFSIFSMCCLLGLATWQVLYLR 196
            ..:|.....:.:...|::......|.||.:.|...|..|:||.::|:.....||.::..||..|:
Mouse   145 TQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSVGQVFLLK 209

  Fly   197 RYFKAKK 203
            .:|..|:
Mouse   210 SFFSDKR 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:426051 43/187 (23%)
Tmed7NP_079974.1 EMP24_GP25L 36..213 CDD:426051 43/187 (23%)

Return to query results.
Submit another query.