DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bai and tmed5

DIOPT Version :10

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:XP_031755940.1 Gene:tmed5 / 549314 XenbaseID:XB-GENE-951292 Length:223 Species:Xenopus tropicalis


Alignment Length:207 Identity:48/207 - (23%)
Similarity:92/207 - (44%) Gaps:23/207 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CAWSSHAV----MFKLSPNTQKCLKEDIQANQLVMGEFEVSDVPGQIIDYIARDTKGHILSQKEH 74
            |...|.:|    .|.|....::|..:.::.:..:..|::|.|..|..:|:......|.:|..:|.
 Frog    19 CMGFSQSVDSDYTFTLPAGQKECFFQPMKRDATLEIEYQVLDGAGLDVDFSLTSPNGELLLSEER 83

  Fly    75 ITKGKFSFMSEVYDTYEICFISKVPAHQRGVI-QEVSL--LTKKGVETKSYEGIGEASKLKPLEV 136
            .:.|..| :..:...|:.||.:........|| .|:.|  |..:|.|.:.::.....:.|    :
 Frog    84 QSDGVHS-VETIDGDYQFCFDNSFSRMSEKVIFFELILDHLNDEGNELEDWKSYITGTDL----L 143

  Fly   137 DLKRLEDLSDSI----------VRDFVLMRKREEEMRDTNEKTNSRVLFFSIFSMCCLLGLATWQ 191
            |:| |||:.::|          .:...|::..|...|:..|....||.|:|:|::..::.::..|
 Frog   144 DMK-LEDILETINSVKGRLTKSAQIQTLLKAFEARDRNLQESNFERVTFWSVFNLTVMVVVSALQ 207

  Fly   192 VLYLRRYFKAKK 203
            |..||..|:.|:
 Frog   208 VYMLRSLFEDKR 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:426051 44/196 (22%)
tmed5XP_031755940.1 EMP24_GP25L 29..216 CDD:426051 43/192 (22%)

Return to query results.
Submit another query.