DRSC/TRiP Functional Genomics Resources

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Protein Alignment bai and TMED9

DIOPT Version :9

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_059980.2 Gene:TMED9 / 54732 HGNCID:24878 Length:235 Species:Homo sapiens


Alignment Length:219 Identity:56/219 - (25%)
Similarity:105/219 - (47%) Gaps:15/219 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARAAFIVCLLMACAWSSHAVMFKLSPNTQKCLKEDIQANQLVMGEFEVS-----------DVPG 54
            :.|....:.|::..|....|:.|.:....:||..|:|....:|:|.:...           ..||
Human    18 LGRVMRTLLLVLWLATRGSALYFHIGETEKKCFIEEIPDETMVIGNYRTQLYDKQREEYQPATPG 82

  Fly    55 QIIDYIARDTKGHILSQKEHITKGKFSFMSEVYDTYEICFIS---KVPAHQRGVIQEVSLLTKKG 116
            ..:....:|.:..::..:::.::|:|:|.|.....::||..|   |......|::: |.|..:.|
Human    83 LGMFVEVKDPEDKVILARQYGSEGRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLR-VHLDIQVG 146

  Fly   117 VETKSYEGIGEASKLKPLEVDLKRLEDLSDSIVRDFVLMRKREEEMRDTNEKTNSRVLFFSIFSM 181
            .....|..|....||..|::.:::|.:..:.|.::....|.|||..|.|:|.||.|||::||...
Human   147 EHANDYAEIAAKDKLSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQT 211

  Fly   182 CCLLGLATWQVLYLRRYFKAKKLI 205
            ..|:.:..||:.:|:.:|:||||:
Human   212 LILVAIGVWQMRHLKSFFEAKKLV 235

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:279450 48/193 (25%)
TMED9NP_059980.2 EMP24_GP25L 37..230 CDD:307313 48/193 (25%)
Required for interaction with STX17. /evidence=ECO:0000269|PubMed:21545355 121..160 9/39 (23%)
COPI vesicle coat-binding. /evidence=ECO:0000255 228..235 4/6 (67%)