DRSC/TRiP Functional Genomics Resources

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Protein Alignment bai and tmed5

DIOPT Version :10

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:XP_073788325.1 Gene:tmed5 / 393374 ZFINID:ZDB-GENE-040426-1302 Length:226 Species:Danio rerio


Alignment Length:214 Identity:50/214 - (23%)
Similarity:94/214 - (43%) Gaps:21/214 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AAFIVCLLMACAWSSHA---VMFKLSPNTQKCLKEDIQANQLVMGEFEVSDVPGQIIDYIARDTK 65
            |...||:.:|.|:|...   ..|.|:...::|..:.::.:..:..|::|.|.....:|:......
Zfish    13 ACLSVCVSLASAFSQSLDSDFTFTLAAGRRECFFQTMKKDASLEIEYQVLDGASLDVDFQLNSPS 77

  Fly    66 GHILSQKEHITKGKFSFMSEVYDTYEICFISKVPAHQRGVIQEVSLLTKKG--VETKSYEGIGEA 128
            |||::.....:.|..:..:|..| |..||.:...|....||....:|...|  .|::.::...:.
Zfish    78 GHIIASDYRKSDGVHTVETEEGD-YMFCFDNTFSAVSEKVIFFELILDNMGEDEESEDWKAYVQG 141

  Fly   129 SKLKPLEVDLKRLEDLSDSI----------VRDFVLMRKREEEMRDTNEKTNSRVLFFSIFSMCC 183
            :.|    :|:| |||:.|:|          ::...|:|..|...|:..|....||..:|..::..
Zfish   142 ADL----LDMK-LEDIMDTINNVKSRLGKSLQIQTLLRAFEARDRNLQESNYERVNLWSCTNVLV 201

  Fly   184 LLGLATWQVLYLRRYFKAK 202
            ::.::..||..||..|:.|
Zfish   202 MVIVSGVQVYLLRSLFEDK 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:426051 42/194 (22%)
tmed5XP_073788325.1 None

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