DRSC/TRiP Functional Genomics Resources

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Protein Alignment bai and loj

DIOPT Version :10

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_648027.3 Gene:loj / 38698 FlyBaseID:FBgn0061492 Length:237 Species:Drosophila melanogaster


Alignment Length:223 Identity:38/223 - (17%)
Similarity:80/223 - (35%) Gaps:34/223 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AFIVCLLMACAWSSH-------------AVMFK--LSPNTQKCLKEDIQANQLVMGEFEVSDVPG 54
            |.|.|.|:....|:.             |:.:|  :....:.|..:.::|.......|.|.....
  Fly    17 ALICCCLLIDVTSAQEAQQPWYENLPAVAMDYKVHIDAGKEDCYHQYVKAGATFYVSFSVVRGGD 81

  Fly    55 QIIDYIARDTKGHILSQKEHITKGKFSFMSEVYDTYEICFISKVPAHQRGVIQEVSLLTKKGVET 119
            .:..:..|:..|.::...:......::........|.:| |....:...|.:..:.:...|....
  Fly    82 GMAGFAVRNPAGEVVKPYQWQATADYTDQVSPGGYYSVC-IDNQFSRFAGKLVNIYITVVKYDAW 145

  Fly   120 KSYEGIGEASKLKPLEVDLKRLEDLSDSIVRDFVLM-----RKREEEMRD-----TNEKTNSRVL 174
            ..|     |.:::.|:::::.......::.|:...|     ..|..|.||     .|   |:.:.
  Fly   146 DKY-----AKEIEQLQLNMQNFTATVGTVERNINDMMGYQAHSRHRESRDYALLLDN---NAYIQ 202

  Fly   175 FFSIFSMCCLLGLATWQVLYLRRYFKAK 202
            .|||..:..:|...:.||.::|:.|:.|
  Fly   203 TFSISQIVVILITCSVQVFFVRKLFEVK 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:426051 31/191 (16%)
lojNP_648027.3 EMP24_GP25L 47..228 CDD:426051 30/189 (16%)

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