DRSC/TRiP Functional Genomics Resources

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Protein Alignment bai and tmed-13

DIOPT Version :10

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_741426.2 Gene:tmed-13 / 260287 WormBaseID:WBGene00022255 Length:222 Species:Caenorhabditis elegans


Alignment Length:197 Identity:42/197 - (21%)
Similarity:71/197 - (36%) Gaps:55/197 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FEVSDVPGQIIDYIARDTKGHILSQKEHIT----------------KGKFSF--------MSEVY 87
            |||.....|:      |.....|:.:.|::                .||..|        ..|:.
 Worm    40 FEVHQPHSQM------DISVSALNSEYHLSVELFNPSGSSTFKTPNNGKHYFKFPEVDGTFHEIG 98

  Fly    88 DTYEICFISKVPAHQRGVIQEVSLLTKKGVETKSYEGIGEASKLKPLEVD---------LKRLED 143
            | :::|..|      |.|.|.|.:.....:..|:...|..||.||.::.:         ||..|.
 Worm    99 D-FQLCVSS------RQVRQSVQVNLIIVIHEKNANNIDVASNLKRIQTNPSYDETKMTLKTFEQ 156

  Fly   144 LSDSIVRDFVLMRKREEEMRDTNEKTNSR--------VLFFSIFSMCCLLGLATWQVLYLRRYFK 200
            ::.:|.....:| |.|:..|...||.:.:        :.|:.|..:|.:..:|.:||..:|....
 Worm   157 ITLNIDVKLKIM-KTEQAKRAFVEKIDRQHIETAFEMINFWHIMRVCLVFFIAGFQVHAIRTLLS 220

  Fly   201 AK 202
            .|
 Worm   221 TK 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:426051 41/193 (21%)
tmed-13NP_741426.2 EMP24_GP25L 26..220 CDD:426051 41/193 (21%)

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