DRSC/TRiP Functional Genomics Resources

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Protein Alignment bai and tmed-1

DIOPT Version :10

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_502288.1 Gene:tmed-1 / 178145 WormBaseID:WBGene00010670 Length:234 Species:Caenorhabditis elegans


Alignment Length:160 Identity:33/160 - (20%)
Similarity:55/160 - (34%) Gaps:28/160 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 HILSQKEHITKGKFSFMSEVYDTYEICFISKVPAHQRGVI-QEVSLLTKKGVETKSYEGIGEA-- 128
            :||.|.:....|...........|::||.:......|.|: .|:.|....|       .:.||  
 Worm    72 NILKQDQLKVDGSHRIELNQPGDYQVCFDNSFSYQSRKVVFFEIFLFDAHG-------NLDEADL 129

  Fly   129 -----------SKLKPLEVDLKRLEDLSDSIVRDF-------VLMRKREEEMRDTNEKTNSRVLF 175
                       :|:..|.|.:......::.|..:.       .|:|..|...|........||.|
 Worm   130 SAMARTDSDLSAKMNELGVTIDEFHRRANGIKNNLNKVEYHQALLRAHEARDRAVMSANFDRVTF 194

  Fly   176 FSIFSMCCLLGLATWQVLYLRRYFKAKKLI 205
            :|:.....::|:|..||..:|..|:....|
 Worm   195 WSVVHTLVMVGVAGVQVFMIRSLFEENSKI 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:426051 31/153 (20%)
tmed-1NP_502288.1 EMP24_GP25L 24..219 CDD:426051 31/153 (20%)

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