DRSC/TRiP Functional Genomics Resources

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Protein Alignment bai and TMED2

DIOPT Version :10

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_001308374.1 Gene:TMED2 / 10959 HGNCID:16996 Length:208 Species:Homo sapiens


Alignment Length:225 Identity:52/225 - (23%)
Similarity:100/225 - (44%) Gaps:37/225 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARAAFIVCLLMACAWSSHAVMFKLSPNTQKCLKEDIQANQLVMGEFEVSDVPGQIID----YIA 61
            |...|.::.||.|...:.......:..:.::|..|.:.:...:...|||::  |..:|    ...
Human     1 MVTLAELLVLLAALLATVSGYFVSIDAHAEECFFERVTSGTKMGLIFEVAE--GGFLDIDVEITG 63

  Fly    62 RDTKGHILSQKEHITKGKFSFMSEVYDTYEICFISKVPAHQRGVIQEVSLLTKKGVETKSYEGIG 126
            .|.||.....:|  :.||::|.:.:..||:.||.::           :|.:|.|.|....  .||
Human    64 PDNKGIYKGDRE--SSGKYTFAAHMDGTYKFCFSNR-----------MSTMTPKIVMFTI--DIG 113

  Fly   127 EASKLKPLEVD---------LKRLEDLSDSIVRDFVLMRKREEEM-------RDTNEKTNSRVLF 175
            ||.|.:.:|.:         ..:||::.:.:......::..:|.|       |..|:.|||||:.
Human   114 EAPKGQDMETEGGGDTWDAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVL 178

  Fly   176 FSIFSMCCLLGLATWQVLYLRRYFKAKKLI 205
            :|.|....|:.:...|:.||:|:|:.::::
Human   179 WSFFEALVLVAMTLGQIYYLKRFFEVRRVV 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:426051 46/199 (23%)
TMED2NP_001308374.1 EMP24_GP25L 20..203 CDD:426051 46/199 (23%)

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