DRSC/TRiP Functional Genomics Resources

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Protein Alignment bai and Tmed10-ps

DIOPT Version :10

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:XP_036014158.1 Gene:Tmed10-ps / 100042773 MGIID:3782198 Length:219 Species:Mus musculus


Alignment Length:216 Identity:115/216 - (53%)
Similarity:146/216 - (67%) Gaps:25/216 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AAFIVCLLMACAWSSHAVMFKLSPNTQKCLKEDIQANQLVMGEFEVSDVPG---------QIIDY 59
            :|::..||:..: |...:.|.|..|::|||:|:|..:.||.|.:|::|..|         :|   
Mouse    16 SAWLFLLLLGPS-SVLGISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRPHLKI--- 76

  Fly    60 IARDTKGHILSQKEHITKGKFSFMSEVYDTYEICFISK----VPAHQRGVIQEVSLLTKKGVETK 120
              .|:.||||..||..|||||:|.:|.||.:|:||.||    :|.      |.|.|..|.|||.|
Mouse    77 --TDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGQIPD------QLVILDMKHGVEAK 133

  Fly   121 SYEGIGEASKLKPLEVDLKRLEDLSDSIVRDFVLMRKREEEMRDTNEKTNSRVLFFSIFSMCCLL 185
            :||.|.:..|||||||:|:||||||:|||.||..|:|||||||||||.||:|||:||||||.||:
Mouse   134 NYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLI 198

  Fly   186 GLATWQVLYLRRYFKAKKLIE 206
            |||||||.||||:||||||||
Mouse   199 GLATWQVFYLRRFFKAKKLIE 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:426051 103/192 (54%)
Tmed10-psXP_036014158.1 EMP24_GP25L 31..213 CDD:426051 103/192 (54%)

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