DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ythdf and PHO92

DIOPT Version :9

Sequence 1:NP_001262943.1 Gene:Ythdf / 42995 FlyBaseID:FBgn0039261 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_010662.3 Gene:PHO92 / 851980 SGDID:S000002782 Length:306 Species:Saccharomyces cerevisiae


Alignment Length:243 Identity:78/243 - (32%)
Similarity:125/243 - (51%) Gaps:27/243 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 NAGPFGPPNARRHDGGPHPSRNSERSGNYSSFRGSEFESASKFEYRDENQSRPVEATSATEELPV 354
            |:.|....|..||.........|:.|.|               .|..|..|:|.....:|:|   
Yeast    84 NSIPLTSSNLNRHFSFSRDYNQSDNSNN---------------NYYREYLSKPRYLQQSTKE--- 130

  Fly   355 DSQLVLDELKDKNN--YNPKVLDLKKAGSARFFVIKSYSEDDIHRSIKYEIWCSTDHGNKRLDDA 417
               ...:|:..:.:  ..|..|::.:  ::|||||||.|...:.||....||.||..|||||.:|
Yeast   131 ---QTFNEINKRKSAAIIPPWLNIPE--NSRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEA 190

  Fly   418 FKERHEEGGNIMLFFSVNGSGHFCGMAQMMTPVDYNSTSSVWSQDKWRGK-FKVKWIYVKDVPNG 481
            :|:.: .|..:.||||:|.||.|||:|:|::.:..:..:|:|..::..|| |||:|:.|:|:.|.
Yeast   191 YKKLN-SGAKVFLFFSINTSGRFCGVAEMVSDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNR 254

  Fly   482 TLRHIRLENNENKSVTNSRDTQEVPNDKGIEVLQILHSYNHSTSIFDD 529
            :|:...:.:||.|.:|:||||||:|...||.::.:..:.:.....|.|
Yeast   255 SLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLFKTQDSDIFSFLD 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YthdfNP_001262943.1 YTH 382..518 CDD:309322 59/136 (43%)
PHO92NP_010662.3 YTH 155..291 CDD:398013 59/136 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346791
Domainoid 1 1.000 123 1.000 Domainoid score I1223
eggNOG 1 0.900 - - E1_KOG1901
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000639
OrthoInspector 1 1.000 - - oto99633
orthoMCL 1 0.900 - - OOG6_102335
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2345
SonicParanoid 1 1.000 - - X383
TreeFam 00.000 Not matched by this tool.
98.670

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