DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ythdf and ECT6

DIOPT Version :9

Sequence 1:NP_001262943.1 Gene:Ythdf / 42995 FlyBaseID:FBgn0039261 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001327579.1 Gene:ECT6 / 820996 AraportID:AT3G17330 Length:595 Species:Arabidopsis thaliana


Alignment Length:440 Identity:134/440 - (30%)
Similarity:197/440 - (44%) Gaps:93/440 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 PNNKPPPVPSPPSPIDLG-------YSDLSSDFSISSNTAPPLGARAEKVHKDTENFLKYEHKGL 253
            |.|  |.:|.....:|..       |||...:.:.||.|..|...:.:.|...:.:       .|
plant    57 PYN--PYIPGASIGVDSSFVGFQQYYSDPPYESAASSPTYVPYVIQPDMVSNSSTD-------SL 112

  Fly   254 GNNNNFSRAKVSPTGPVRRNLGPQQPVHHAAPRPATNAGPFGPPNARRH---DGGPH-------- 307
            ..|...|..:    |.::||......:...||: :|..|.:..|...::   ....|        
plant   113 VANGGQSDGR----GSMQRNGSAIAGLPKDAPK-STTTGQYKQPGIPKNVSTTASAHSLQGKTAY 172

  Fly   308 -----PSRNSERSGNYSSFRGSEFESASK-FEYRDEN----------QSRPVEATSATEELPV-- 354
                 |...|:.:...||.....::..|| ::.|.:|          |:|......:..:|.|  
plant   173 ANTLLPYGKSDIANGVSSIASYSYKPCSKIYDARGDNNTTGSTYTSEQNRGSRTRRSRNQLIVKA 237

  Fly   355 ----------DSQLVLDELKDKNNYNPKVLDLKKAGSARFFVIKSYSEDDIHRSIKYEIWCSTDH 409
                      :..:|:    :.:.||.:...::.: .|||||||||||||:|:||||.:|.||.:
plant   238 YTTKAGNADAEGNIVI----NPDRYNKEDFSIEYS-DARFFVIKSYSEDDVHKSIKYGVWSSTLN 297

  Fly   410 GNKRLDDAFKERHEEGGN------IMLFFSVNGSGHFCGMAQMMTPVDYNSTSSVWSQDKWRGKF 468
            |||:|...:::.......      |.||||||.||.|||:|:|..||.::.....|.||||.|.|
plant   298 GNKKLQSVYEDAQRIATEKSRECPIFLFFSVNSSGLFCGVAEMTGPVSFDRDMDFWQQDKWSGSF 362

  Fly   469 KVKWIYVKDVPNGTLRHIRLENNENKSVTNSRDTQEVPNDKGIEVLQILHSYNHSTSIFDDFFHY 533
            .|||..:|||||...|||.|.|||||.|||||||||:...:|:|||::...:...||:.|||.:|
plant   363 PVKWHIIKDVPNSYFRHIILHNNENKPVTNSRDTQEIILKQGLEVLKLFKHHAEKTSLLDDFMYY 427

  Fly   534 EKKQE--EEVSSKRPPMHGPDGNNHAPAPLARSFNR-----QADDKDRDR 576
            |.:|.  :|..::.|               .|:|.|     ..|..||.:
plant   428 EDRQRLMQEERARLP---------------FRTFRRPFPVLNLDFSDRSK 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YthdfNP_001262943.1 YTH 382..518 CDD:309322 78/141 (55%)
ECT6NP_001327579.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 176 1.000 Domainoid score I1083
eggNOG 1 0.900 - - E1_KOG1901
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000639
OrthoInspector 1 1.000 - - otm2739
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12357
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X383
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.870

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