DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ythdf and YTHDF3

DIOPT Version :9

Sequence 1:NP_001262943.1 Gene:Ythdf / 42995 FlyBaseID:FBgn0039261 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001264742.1 Gene:YTHDF3 / 253943 HGNCID:26465 Length:588 Species:Homo sapiens


Alignment Length:417 Identity:180/417 - (43%)
Similarity:233/417 - (55%) Gaps:81/417 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 AAPKKTTWASIASQPAKLTSRAASTTSNSKKKGPGMPPPPMVPGKHNLDVNVWDLPNNKPPPVPS 205
            ||||.|:||:||.:|||...: .....|....|..:||||:   |||:::..||   .|...|.:
Human   234 AAPKPTSWAAIARKPAKPQPK-LKPKGNVGIGGSAVPPPPI---KHNMNIGTWD---EKGSVVKA 291

  Fly   206 PPS-PIDLGYSDLSSDFSISSNTAPPLGARAEKVHKDTENFLKYEHKGLGNNNNFSRAKVSPTGP 269
            ||: |:                 .||            :..::.           .:..:.|...
Human   292 PPTQPV-----------------LPP------------QTIIQQ-----------PQPLIQPPPL 316

  Fly   270 VRRNLGPQQPVHHAAPRPATNAGPFGPPNARRHDGGPHPS---------RNSERSGNYSSFRGSE 325
            |:..|..|||   ..|:|....||  .|.|:.|...|...         ||.....|.::..|| 
Human   317 VQSQLPQQQP---QPPQPQQQQGP--QPQAQPHQVQPQQQQLQNRWVAPRNRGAGFNQNNGAGS- 375

  Fly   326 FESASKFEYRDENQSRPVEATSATEELPVDSQLVLDELKDKNNYNPKVLD--LKKAGSARFFVIK 388
                       ||....|...||:.. .|:...||::||..||||||..|  ||   :.|.|:||
Human   376 -----------ENFGLGVVPVSASPS-SVEVHPVLEKLKAINNYNPKDFDWNLK---NGRVFIIK 425

  Fly   389 SYSEDDIHRSIKYEIWCSTDHGNKRLDDAFKERHEEGGNIMLFFSVNGSGHFCGMAQMMTPVDYN 453
            |||||||||||||.|||||:|||||||.|::..:.: |.:.|.|||||||||||:|:|.:.||||
Human   426 SYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGK-GPLYLLFSVNGSGHFCGVAEMKSVVDYN 489

  Fly   454 STSSVWSQDKWRGKFKVKWIYVKDVPNGTLRHIRLENNENKSVTNSRDTQEVPNDKGIEVLQILH 518
            :.:.|||||||:|||:||||:||||||..|||||||||:||.|||||||||||.:|..:||:|:.
Human   490 AYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIA 554

  Fly   519 SYNHSTSIFDDFFHYEKKQEEEVSSKR 545
            ::.|:|||||||.||||:||||.:.:|
Human   555 TFKHTTSIFDDFAHYEKRQEEEEAMRR 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YthdfNP_001262943.1 YTH 382..518 CDD:309322 95/135 (70%)
YTHDF3NP_001264742.1 YTH 420..553 CDD:367840 94/133 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151912
Domainoid 1 1.000 207 1.000 Domainoid score I2882
eggNOG 1 0.900 - - E1_KOG1901
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 288 1.000 Inparanoid score I2829
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000639
OrthoInspector 1 1.000 - - otm41347
orthoMCL 1 0.900 - - OOG6_102335
Panther 1 1.100 - - O PTHR12357
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2345
SonicParanoid 1 1.000 - - X383
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1110.820

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