Sequence 1: | NP_651321.1 | Gene: | Smg6 / 42994 | FlyBaseID: | FBgn0039260 | Length: | 948 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_174147.1 | Gene: | AT1G28260 / 839720 | AraportID: | AT1G28260 | Length: | 880 | Species: | Arabidopsis thaliana |
Alignment Length: | 671 | Identity: | 136/671 - (20%) |
---|---|---|---|
Similarity: | 243/671 - (36%) | Gaps: | 189/671 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 164 LPHAKNIVH------------LYDQLMVLNQRNLILINWKNFCYIHDQLQDAFKQLLLEQLKFVC 216
Fly 217 EHKVDVFFWKLLFYNVRNYLKRQQTDQAHTHT---LLLIEQAIKFYRMLYDKLMA--KCVASSRC 276
Fly 277 DSALKVVAQRLLICLGDLTRYRVNHVKA---TDYMEAARYYQRAQELVPGNGAPFNQLAVISIYH 338
Fly 339 HKRFDAVYYYVRSLLTSNSIQSAKESLLDLFDEIRRKYEETEMKQSPMHYAAGSKNQKSKQMRKE 403
Fly 404 VWIYPDGIRRLHRTDDKGNKAKGNKATMAEVNRYEEMPPEEILPRIV--SLYLYL------LGKL 460
Fly 461 YTGTDVDSLYPLLRKLQIQIGVALRHENLLSRS------------KLLKIVALNLFVVEHNKPKT 513
Fly 514 SRREMRYHSFNFANSFFGLMMKKTNQLLAGFVEDSTNVQCL---PEEDFATVNTYLQFVNVYVRW 575
Fly 576 LSISLDVWEPVRSEEHSFID--CWAELTILFEYIECLMGKHKLE------KNEILLDEDVALRGF 632
Fly 633 TPLGRETLSMDY-------------------------------LKRGSERLQFFERVR-----RI 661
Fly 662 GQFQ---EYYVQHQEALQQ-----------PLES--SFTVEHLNAAMKNAL---ENYDAESCGLA 707
Fly 708 ANVSKIQCKAVEELLCRSTDS 728 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Smg6 | NP_651321.1 | EST1 | 190..298 | CDD:287360 | 24/112 (21%) |
EST1_DNA_bind | 310..638 | CDD:287359 | 75/358 (21%) | ||
P-loop_NTPase | <616..>769 | CDD:304359 | 33/174 (19%) | ||
PIN_Smg6 | 767..941 | CDD:189055 | |||
AT1G28260 | NP_174147.1 | EST1 | 70..151 | CDD:287360 | 21/80 (26%) |
EST1_DNA_bind | 164..471 | CDD:287359 | 75/359 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 62 | 1.000 | Domainoid score | I3772 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2162 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0006417 | |
OrthoInspector | 1 | 1.000 | - | - | otm3323 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR15696 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
7 | 6.960 |