Sequence 1: | NP_651321.1 | Gene: | Smg6 / 42994 | FlyBaseID: | FBgn0039260 | Length: | 948 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005245328.1 | Gene: | SWT1 / 54823 | HGNCID: | 16785 | Length: | 907 | Species: | Homo sapiens |
Alignment Length: | 644 | Identity: | 129/644 - (20%) |
---|---|---|---|
Similarity: | 234/644 - (36%) | Gaps: | 214/644 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 351 SLLTSNSIQSAKESLLDLFDEIRRKYEETEMKQSPMHYAAGSKNQKSKQMRKEVWIYPDGIRRLH 415
Fly 416 RTDDKGNK------------------AKGNKATMAEVNRYEEMPPEEILPRIVSLYLYLLGKL-Y 461
Fly 462 TGTDVDSLYPLLRKLQIQIGVALRHENLLSRSKLLKIVALNLFVVEHNKPKTSRREMRYHSFNFA 526
Fly 527 NSFFGLMMKKTNQLLAGFVEDSTNVQCLPEEDFATVNTYLQFVNVYVRWLSISLDVWEPVRS--- 588
Fly 589 -----EEHSFIDCWAELTILFEYIECLMGKHKLEKNEILLDEDVALRGFTPLGRETLSMDYLKRG 648
Fly 649 SERLQFFERVRRIGQF-QEYYVQHQEALQQPLESSFTVEHLNAAMKNALENYDAESCGLAANVSK 712
Fly 713 IQ-----CKAVEELLCRSTDSDV---SELCKLKKELE----AKARVKQICTSKLEDILKFVDTKI 765
Fly 766 YIEVRPRYLLPDTNCFIDCLEDFEKLSTE----FKRYTLIIPLTVVKELDGLSKGVKLDSYRSSK 826
Fly 827 QTQRIHHFDEVSSRAKKSLEFIKSAKGN---------VKCATTKGSFVNASVFALVEEEYLSNDD 882
Fly 883 KILATAMAVSKTAKTEQCTDGKCFIQTE-------LVLITTDRNLR-------VKALSR 927 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Smg6 | NP_651321.1 | EST1 | 190..298 | CDD:287360 | |
EST1_DNA_bind | 310..638 | CDD:287359 | 57/313 (18%) | ||
P-loop_NTPase | <616..>769 | CDD:304359 | 33/165 (20%) | ||
PIN_Smg6 | 767..941 | CDD:189055 | 46/188 (24%) | ||
SWT1 | XP_005245328.1 | PIN_Smg5-Smg6-like | 396..537 | CDD:189050 | 46/189 (24%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1427 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |