Sequence 1: | NP_651321.1 | Gene: | Smg6 / 42994 | FlyBaseID: | FBgn0039260 | Length: | 948 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285914.1 | Gene: | Smg5 / 34804 | FlyBaseID: | FBgn0019890 | Length: | 1177 | Species: | Drosophila melanogaster |
Alignment Length: | 851 | Identity: | 171/851 - (20%) |
---|---|---|---|
Similarity: | 286/851 - (33%) | Gaps: | 243/851 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 189 NWKNFCYIHDQLQD-AFKQLLLEQL-KFVCEHKVDVFFWKLLFYNVRNYLKRQQTDQAHTHTL-- 249
Fly 250 -LLIEQAI----KFYRMLYDKLMAKCVASSRCDSALKVVAQRL------LICLGDLTRY----RV 299
Fly 300 NHVKATDYMEAARYYQRAQELVPGNGAPFNQLAVISIYHHKRFDAVYYYVRSLLTSNSIQSAKES 364
Fly 365 LLDLFDEIRRKYEETEMKQSPMHYAAGSKNQKSKQMRKEVWIYPDGIRRLHRTDDKGNKAKGNKA 429
Fly 430 TMAEVNRY-EEMPPEEILPRIVSLY--LYLLGKL-YTGTDVDSLYPLLRKLQIQIGVALRHENL- 489
Fly 490 LSRSKLLKIVALNLFVVEHNKPKTSRREMRYHSFNFA--NSFFGLMMKKTNQLLAGFVEDSTNVQ 552
Fly 553 CLPEEDFATVNTYL-QFVNVYVRWLSISLDVWEPVRSEE------HSFIDCWAELTILFEYIECL 610
Fly 611 MGKHKLE--KNEILLDED-----VALRGF---------TPLGRETLSMDYLKRGSERLQFFERVR 659
Fly 660 RIGQFQEYYVQHQEALQQPLESSFTVEH-----LNAAMKNALENYDA----ESCG----LAANVS 711
Fly 712 KIQCKA--------------------VE----------ELLCRSTDSDVSELCKLKKELEAKARV 746
Fly 747 KQICTSK---------LEDILKFVDTKIYIEVRPRYLLPDTNCFIDCLED---FEKLSTEFKRYT 799
Fly 800 LIIPLTVV----KELDGLSKGVKLDSYRSSKQTQRIHHFDE---VSSRAKKSLEFIKSAKGNVKC 857
Fly 858 ATTKGSFVNASVF----------ALVEEEYLSNDDKILATAMAV--------SKTAKTEQCTDGK 904
Fly 905 CFIQTE 910 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Smg6 | NP_651321.1 | EST1 | 190..298 | CDD:287360 | 31/126 (25%) |
EST1_DNA_bind | 310..638 | CDD:287359 | 69/357 (19%) | ||
P-loop_NTPase | <616..>769 | CDD:304359 | 46/220 (21%) | ||
PIN_Smg6 | 767..941 | CDD:189055 | 32/172 (19%) | ||
Smg5 | NP_001285914.1 | EST1 | 99..222 | CDD:287360 | 30/122 (25%) |
EST1_DNA_bind | 240..478 | CDD:287359 | 59/311 (19%) | ||
PIN_Smg5 | 1012..1173 | CDD:189054 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2162 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR15696 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |