Protein Alignment Smg6 and est1

DIOPT Version :9

• Sequence 1: NP_651321.1
• Gene: Smg6 / 42994
• FlyBaseID: FBgn0039260
• Length: 948
• Species: Drosophila melanogaster
• Sequence 2: NP_596232.1
• Gene: est1 / 2540492
• PomBaseID: SPBC2D10.13
• Length: 490
• Species: Schizosaccharomyces pombe
• Alignment Length: 249
• Identity: 53/249 - (21%)
• Similarity: 85/249 - (34%)
• Gaps: 80/249 - (32%)

  Fly   151 TTEHPD--WFEPLLGLPHAKNIVHLYDQLMVLNQRNLILINWKNFCYIHDQLQDAFKQLLLEQLK 213
            |.|.||  |     ...|.|.|.|...:...::.|::
pombe    59 TFERPDIIW-----SCCHYKIIQHFRSRFREIHPRHV---------------------------- 90

  Fly   214 FVCEHKVDVFFWKLL-----FYN--VRNYLKRQQTDQAHTHTLLLIEQAIKFYRMLYDKLMAKCV 271
             |.:.|....|:|.|     ||.  :...:.:.|.|.               ||..:.|..:...
pombe    91 -VEKKKTKKVFFKFLKTCAIFYQTCISELISKFQLDS---------------YRPFFCKWTSSAT 139

  Fly   272 ASSRCDS-----------------ALKVVAQRLLICLGDLTRYRVNHVKATD-YMEAARYYQRAQ 318
            .||...:                 ||:.| ....|.|||:.||....:|... |..|..:|..|.
pombe   140 VSSTISNDEMSSIPEASYSRNHMEALECV-YNCFIYLGDMARYSSTCLKKRGAYDRALGFYDLAH 203

  Fly   319 ELVPGNGAPFNQLAVISIYHHKRFDAVYYYVRSLLTSNSIQSAKESLLDLFDEI 372
            ..:||||...||:||:........:::|::..:|.:.:..:||   ||:|..::
pombe   204 RTLPGNGMHRNQIAVVWASDECIVESIYWFSSALCSEDPPKSA---LLNLLKQL 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Smg6	NP_651321.1	EST1	190..298	CDD:287360	22/131 (17%)
		EST1_DNA_bind	310..638	CDD:287359	18/63 (29%)
		P-loop_NTPase	<616..>769	CDD:304359
		PIN_Smg6	767..941	CDD:189055
est1	NP_596232.1	EST1	64..184	CDD:287360	30/169 (18%)
		EST1_DNA_bind	195..450	CDD:287359	18/63 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG2162
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR15696
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.000