Sequence 1: | NP_651321.1 | Gene: | Smg6 / 42994 | FlyBaseID: | FBgn0039260 | Length: | 948 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_595712.1 | Gene: | SPBC2F12.03c / 2540346 | PomBaseID: | SPBC2F12.03c | Length: | 891 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 600 | Identity: | 109/600 - (18%) |
---|---|---|---|
Similarity: | 177/600 - (29%) | Gaps: | 253/600 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 107 TSVAGDVNRNGQGQGKNKSGNSARRRGRKDKEHATQSPVTRTRLTTEHPDWFEPLLGL----PHA 167
Fly 168 KNIVHLYDQLMVLNQRNLILI-------NWKNFCYIHDQLQDAFKQLLLEQLKFVCEHKVDVFFW 225
Fly 226 KLLFYNVRNYLKRQ--QTDQAHTHTLL---------LIEQAIKFYRML---------------YD 264
Fly 265 KLMAKCV-----------------------ASSRC---------DSALKVVA------------- 284
Fly 285 -----------------------QRLLIC-------LGDLTRY--RVNHVKATDYMEAARYYQRA 317
Fly 318 QELVPGNGAPFNQLAVISI-----------------------YHHKR----FDAVYYYVRSLLTS 355
Fly 356 NSI--QSAKESLLDLFDEIRRKYEETEMKQSPMHYAAGSKNQKSKQMRKEVWIYPDGIRRLHRTD 418
Fly 419 DKGNKAKGNKATMAEVNRYEEMPPEEILPRIVSLYLYLLGKLYTGTDVDSLY---PLLRKLQIQI 480
Fly 481 GVALRHENLLSRSKLLKIV--ALNLFVVEHNKPKTSRREMRYHSFNFANSFFGLMMKKTNQLLAG 543
Fly 544 FVE---DSTNVQCLP 555 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Smg6 | NP_651321.1 | EST1 | 190..298 | CDD:287360 | 32/210 (15%) |
EST1_DNA_bind | 310..638 | CDD:287359 | 57/282 (20%) | ||
P-loop_NTPase | <616..>769 | CDD:304359 | |||
PIN_Smg6 | 767..941 | CDD:189055 | |||
SPBC2F12.03c | NP_595712.1 | EST1 | 132..314 | CDD:287360 | 27/181 (15%) |
EST1_DNA_bind | 326..647 | CDD:287359 | 57/282 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR15696 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |