Sequence 1: | NP_651321.1 | Gene: | Smg6 / 42994 | FlyBaseID: | FBgn0039260 | Length: | 948 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_501033.1 | Gene: | smg-7 / 177435 | WormBaseID: | WBGene00004885 | Length: | 458 | Species: | Caenorhabditis elegans |
Alignment Length: | 580 | Identity: | 103/580 - (17%) |
---|---|---|---|
Similarity: | 203/580 - (35%) | Gaps: | 195/580 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 200 LQDAFKQLLLEQLK------------------FVCE------HKVDVFFWKLLFYNVRNYLKRQQ 240
Fly 241 TDQAHTHTLLLIEQAIKFYRMLY------------------------DKLMAKCVASSRCDSALK 281
Fly 282 VVAQRLLICLGDLTRYRVNHVKATDYMEAARYYQRAQELVPGNGAPFNQLAVISIYHHKRFDAVY 346
Fly 347 YYVRSLLTSNSIQSAKESLLDLFDEIRRKYEETEMKQSPMHYAAGSKNQKSKQMRKEVWIYPDGI 411
Fly 412 RRLHRTDDKGNKAKGNKATMAEVNRYEEMPPEEILPRIVSLYLYLLGKLYTGTDVDSLYPLLRKL 476
Fly 477 QIQIGVALRHENLLSRSKLLKIVALNLFVVEHNKPKTSRREMRYHSFNFANSFFGLMMKKTNQLL 541
Fly 542 AGFVEDSTNVQCLPEEDFATVNTYLQFVNVYVRWLSISLDVWEPVRSEEHSFIDCWAELTILFEY 606
Fly 607 IECLMGKHKLEKNEILLDEDVALRGFTPLGRETLSMDYLKRGSERLQFFERVRRIGQFQEYYVQH 671
Fly 672 QEALQQPLESSFTVEHLNAAMKNALENYDAESCGLAANVSKIQCKAVE-ELLCRSTDSDV 730 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Smg6 | NP_651321.1 | EST1 | 190..298 | CDD:287360 | 28/145 (19%) |
EST1_DNA_bind | 310..638 | CDD:287359 | 52/327 (16%) | ||
P-loop_NTPase | <616..>769 | CDD:304359 | 19/116 (16%) | ||
PIN_Smg6 | 767..941 | CDD:189055 | |||
smg-7 | NP_501033.1 | TPR_2 | 130..163 | CDD:311588 | 12/38 (32%) |
TPR repeat | 130..158 | CDD:276809 | 11/33 (33%) | ||
EST1_DNA_bind | 149..>249 | CDD:371011 | 31/175 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2162 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR15696 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |