DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr96 and NR1I2

DIOPT Version :10

Sequence 1:NP_524493.1 Gene:Hr96 / 42993 FlyBaseID:FBgn0015240 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_071285.1 Gene:NR1I2 / 8856 HGNCID:7968 Length:473 Species:Homo sapiens


Alignment Length:731 Identity:140/731 - (19%)
Similarity:213/731 - (29%) Gaps:351/731 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PKNCAVCGDKALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQN-CDITVVTRRFCQKCRLRKC 67
            |:.|.||||||.||:||.:|||.||.||||......:..|||.:. |:||..|||.||.||||||
Human    77 PQICRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEITRKTRRQCQACRLRKC 141

  Fly    68 LDIGMKSENIMSEE-----DKLIKRRKIETNRAKRRLMENGTDACDADGGEERDHKAPADSSSSN 127
            |:.|||.|.|||:|     ..||||:|                                      
Human   142 LESGMKKEMIMSDEAVEERRALIKRKK-------------------------------------- 168

  Fly   128 LDHYSGSQDSQSCGSADSGANGCSGRQASSPGTQVNPLQMTAEKIVDQIVSDPDRASQAINRLMR 192
                     |:..|:...|..|.:..|                             ...|..||.
Human   169 ---------SERTGTQPLGVQGLTEEQ-----------------------------RMMIRELMD 195

  Fly   193 TQKEAISVMEKVISSQKDALRLVSHLIDYPGDALKIISKFMNSPFNALTVFTKFMSSPTDGVEII 257
            .|.:...                                         |.|:.|.:....||   
Human   196 AQMKTFD-----------------------------------------TTFSHFKNFRLPGV--- 216

  Fly   258 SKIVDSPADVVEFMQNLMHSPEDAIDIMNKFMNTPAEALRILNRILSGGGANAAQQTADRKPLLD 322
               :.|..::.|.:|                  .|:.             ..||:.:..||.|..
Human   217 ---LSSGCELPESLQ------------------APSR-------------EEAAKWSQVRKDLCS 247

  Fly   323 KEPAVKPAAPAERADTVIQSMLGNSPPISPHDAAVDLQYHSPGVGEQPSTSSSHPLPYIANSPDF 387
            .:                                |.||..    ||..|.               
Human   248 LK--------------------------------VSLQLR----GEDGSV--------------- 261

  Fly   388 DLKTFMQTNYNDEPSLDSDFSINSIESVLSEVIRIEYQAFNSIQQAASRVKEEMSYGTQSTYGGC 452
                     :|.:|..||  ....|.|:|                                    
Human   262 ---------WNYKPPADS--GGKEIFSLL------------------------------------ 279

  Fly   453 NSAANNSQPHLQQPICAPSTQQLDRELNEAEQMKLRELRLASEALYDPVDEDLSALMMGDDRIKP 517
                    ||:                                       .|:|..|        
Human   280 --------PHM---------------------------------------ADMSTYM-------- 289

  Fly   518 DDTRHNPKLLQLINLTAVAIKRLIKMAKKITAFRDMCQEDQVALLKGGCTEMMIMRSVMIYDDDR 582
                               .|.:|..||.|:.|||:..|||::||||...|:..:|...:::.:.
Human   290 -------------------FKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAET 335

  Fly   583 AAWKVPH----TKENMGNIRTDLLKFAEGNIYEEHQKFITTFDEKWRMDENIILIMCAIVLFTSA 643
            ..|:...    .::..|..:..||        |...||.... :|.::.|...::|.||.||:..
Human   336 GTWECGRLSYCLEDTAGGFQQLLL--------EPMLKFHYML-KKLQLHEEEYVLMQAISLFSPD 391

  Fly   644 RSRVIHKDVIRLEQNSYYYLLRRYLESVYSGCEARNAFIKLIQKISDVERLN----KFIINVYLN 704
            |..|:...|:...|..:...|:.|:|........|..|:|::..::::..:|    :.::.:. :
Human   392 RPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQ-D 455

  Fly   705 VNPSQVEPLLREIFDL 720
            ::|. ..||::|:|.:
Human   456 IHPF-ATPLMQELFGI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr96NP_524493.1 NR_DBD_CAR 5..98 CDD:143524 51/98 (52%)
NR_LBD 462..>573 CDD:472173 20/110 (18%)
NR_LBD_F1 523..702 CDD:132727 42/186 (23%)
NR1I2NP_071285.1 NR_DBD_PXR 79..166 CDD:143536 48/86 (56%)
NR_LBD_PXR_like 182..467 CDD:132732 82/574 (14%)

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