DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr96 and RORB

DIOPT Version :10

Sequence 1:NP_524493.1 Gene:Hr96 / 42993 FlyBaseID:FBgn0015240 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_001351952.1 Gene:RORB / 6096 HGNCID:10259 Length:470 Species:Homo sapiens


Alignment Length:115 Identity:27/115 - (23%)
Similarity:45/115 - (39%) Gaps:26/115 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 RVVLMTGSTGKAAKAIGGRTLHCTIGLPNEKP-------EDLERL--KYQAFICVTTRLIIIDEI 130
            |.|:..||...|      ..|.|.:.|..|.|       :||..|  |.:...|:..:.:.|.::
Human   380 RTVICRGSEKSA------NILDCFLTLKTEVPIMTEQQKQDLNPLTIKIRCVSCLPIQPVSIHDL 438

  Fly   131 TLLAS-----WHLDATDM-VLKRTPKRTDALFGGLSIILVG-----DLRQ 169
            ..|.|     :....|.: ..||.|..|...|..::::.:|     |:|:
Human   439 ERLCSPVYCRYQFHKTPVHETKREPHGTHVFFRDINVVFLGAMNPSDVRE 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr96NP_524493.1 NR_DBD_CAR 5..98 CDD:143524 6/22 (27%)
NR_LBD 462..>573 CDD:472173
NR_LBD_F1 523..702 CDD:132727
RORBNP_001351952.1 NR_DBD_ROR 14..108 CDD:143526
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..127
NR_LBD_ROR_like 221..461 CDD:132737 19/86 (22%)
AF-2 456..461 0/4 (0%)
Blue background indicates that the domain is not in the aligned region.

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