Sequence 1: | NP_524493.1 | Gene: | Hr96 / 42993 | FlyBaseID: | FBgn0015240 | Length: | 723 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008763482.1 | Gene: | Nr1h4 / 60351 | RGDID: | 628831 | Length: | 516 | Species: | Rattus norvegicus |
Alignment Length: | 449 | Identity: | 98/449 - (21%) |
---|---|---|---|
Similarity: | 147/449 - (32%) | Gaps: | 172/449 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 CAVCGDKALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVTRRFCQKCRLRKCLDIG 71
Fly 72 MKSENIMSEEDKLIKRRKIETNRAKRRLMENGTDACDADGGEERDHKAPADSSSSNLDHYSGSQD 136
Fly 137 SQSCGSADSGANGCSGRQASSPGTQVNPLQMTAEKIVDQIVSDPDRASQAINRLMRTQKEAISVM 201
Fly 202 EKVISSQKDALRLVSHLIDYPGDAL-------KIISKFMNSPFNALTVFTKFMSSPTDGVEIISK 259
Fly 260 IVDSPADVVEF------MQNLMHSPEDAIDIMNKFMNTPAEAL-----RILNRILSGGGANAAQQ 313
Fly 314 TADRKPLLDKEPAVKPAAPAERADTVIQSMLGNSPPISPHDAAVDLQYHSP------GVGEQPST 372
Fly 373 SSSHPL--PYIANSPDFD-LKTFMQTNYNDEPSLDSDFSINSIESVLSEVIRIEYQAFN 428 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hr96 | NP_524493.1 | NR_DBD_CAR | 5..98 | CDD:143524 | 35/90 (39%) |
NR_LBD | 462..>573 | CDD:299703 | |||
NR_LBD_F1 | 523..702 | CDD:132727 | |||
Nr1h4 | XP_008763482.1 | NR_DBD_FXR | 164..251 | CDD:143520 | 39/156 (25%) |
NR_LBD_Fxr | 292..511 | CDD:132734 | 51/250 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166351531 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24082 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.940 |