Protein Alignment Hr96 and nr1h4

DIOPT Version :9

• Sequence 1: NP_524493.1
• Gene: Hr96 / 42993
• FlyBaseID: FBgn0015240
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001002574.1
• Gene: nr1h4 / 436847
• ZFINID: ZDB-GENE-040718-313
• Length: 483
• Species: Danio rerio
• Alignment Length: 338
• Identity: 76/338 - (22%)
• Similarity: 125/338 - (36%)
• Gaps: 124/338 - (36%)

  Fly     7 CAVCGDKALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVTRRFCQKCRLRKCLDIG 71
            |.||||||.||::||:|||.||.||||:......:.|....||::.:..||.||:||||||.::|
Zfish   137 CVVCGDKASGYHYNALTCEGCKVFFRRSITKNAVYKCKSGGNCEMDMYMRRKCQECRLRKCKEMG 201

  Fly    72 MKSENIMSEEDKLIKRRKIETNRAKRRLMENGTDACDADGGEE----RDHKAPADSSSSNLDHYS 132
            |.:|.:::|         |:..  .:||.:|...:.|...|::    ||.|....::..:.::..
Zfish   202 MLAECLLTE---------IQCK--SKRLRKNTKASSDGSIGDDVVDSRDPKQVVSTTKPSKENIE 255

  Fly   133 GSQDSQSCGSADSGANGCSGRQASSPGTQVNPLQMTAEKIVDQIVSDPDRASQAINRLMRTQKEA 197
            .|||.|:
Zfish   256 LSQDQQA---------------------------------------------------------- 262

  Fly   198 ISVMEKVISSQKDALRLVSHLID------YPGDALKIISKFMNSPFNALTVFTKFMSSPTDGVEI 256
                            |:::::|      .|.|..|   |.:...|||...|.......|..|::
Zfish   263 ----------------LINYIVDAHNKHRIPQDMAK---KLLQEQFNAEENFLLLTEMATSHVQV 308

  Fly   257 ISKIVDSPADVVEF------MQNLMHSPEDAIDIMNKFMNTPAEAL-----RILNRILSGGGANA 310
            :          |||      .|:|.|  ||.|.::.   .:..||:     ::.::.|..|....
Zfish   309 L----------VEFTKNIPGFQSLDH--EDQIALLK---GSAVEAMFLRSAQVFSKKLPNGHTEV 358

  Fly   311 AQQTADRKPLLDK 323
            .:....|..:.::
Zfish   359 LEDRIRRSGISEE 371

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr96	NP_524493.1	NR_DBD_CAR	5..98	CDD:143524	38/90 (42%)
		NR_LBD	462..>573	CDD:299703
		NR_LBD_F1	523..702	CDD:132727
nr1h4	NP_001002574.1	NR_DBD_FXR	134..217	CDD:143520	38/90 (42%)
		NR_LBD_Fxr	258..478	CDD:132734	29/206 (14%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170593326
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24082
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.940