Sequence 1: | NP_524493.1 | Gene: | Hr96 / 42993 | FlyBaseID: | FBgn0015240 | Length: | 723 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_035714.3 | Gene: | Nr1d2 / 353187 | MGIID: | 2449205 | Length: | 576 | Species: | Mus musculus |
Alignment Length: | 730 | Identity: | 137/730 - (18%) |
---|---|---|---|
Similarity: | 230/730 - (31%) | Gaps: | 311/730 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 CAVCGDKALGYNFNAVTCESCKAFFRRNALAKKQF-TCPFNQNCDITVVTRRFCQKCRLRKCLDI 70
Fly 71 GMKSENIMSEEDKLIKRRK----IETNRAKRRLM--------ENGTDACDADGGEERDHKA-PAD 122
Fly 123 SSSSNLDHYSGSQDSQSCGSADSGANGCSGRQASSPGTQVNPLQMTAEKIVDQIVSDPDRASQAI 187
Fly 188 NRLMRTQKEAISVMEKVISSQKDALRLVSHLIDYPGDALKIISKFMNSPFNALTVFTKFMSSPTD 252
Fly 253 GVEIISKIVDSPADVVEFMQNLMHSPEDAIDIMNKFMNTPAEALRI--------LNRILSGGGAN 309
Fly 310 AAQQTADRKPLLDKEPAVKPAAPAERADTVIQSMLGNSPPISPHDAAVDLQYHSPGVGEQPSTSS 374
Fly 375 SHPLPYIANSPDFDLKTFMQTNYNDEPSLDSDFSINSIESVLSEVIRIEYQAFNS--IQQAASRV 437
Fly 438 KEEMSYGTQSTYGGCNSAANNS--------QPHLQQPICAPSTQQLDRELNEAEQMKLRELRLAS 494
Fly 495 EALYDPVDEDLSALMMGDDRIKPDDTRHNPKLLQLINLT-AVAIKRLIKMAKKITAFRDMCQEDQ 558
Fly 559 VALLKGGCTEMMIMRSVMIYD-DDRAAWKVPHTKENMGNIRT----DLLKFAEGNIYEEHQKFIT 618
Fly 619 TFDEK---WRMDENIILIMCAIVLFTSARSRVIHKDVIRLEQNSYYYLLRRYLESVYSGCEARNA 680
Fly 681 FIKLIQKISDVERLN 695 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hr96 | NP_524493.1 | NR_DBD_CAR | 5..98 | CDD:143524 | 37/95 (39%) |
NR_LBD | 462..>573 | CDD:299703 | 24/111 (22%) | ||
NR_LBD_F1 | 523..702 | CDD:132727 | 45/182 (25%) | ||
Nr1d2 | NP_035714.3 | Modulating | 1..99 | ||
Required for phosphorylation by CSNK1E and cytoplasmic localization. /evidence=ECO:0000269|PubMed:29533925 | 1..60 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 13..90 | ||||
NR_DBD_REV_ERB | 98..186 | CDD:143540 | 34/84 (40%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 215..246 | 8/130 (6%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 263..282 | 5/24 (21%) | |||
NR_LBD_REV_ERB | 386..574 | CDD:132738 | 48/209 (23%) | ||
Interaction with ZNHIT1. /evidence=ECO:0000250 | 394..576 | 46/185 (25%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167847968 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |