Sequence 1: | NP_524493.1 | Gene: | Hr96 / 42993 | FlyBaseID: | FBgn0015240 | Length: | 723 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005156109.1 | Gene: | raraa / 30680 | ZFINID: | ZDB-GENE-980526-284 | Length: | 447 | Species: | Danio rerio |
Alignment Length: | 419 | Identity: | 102/419 - (24%) |
---|---|---|---|
Similarity: | 166/419 - (39%) | Gaps: | 107/419 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SPP------KNCAVCGDKALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVTRRFCQ 60
Fly 61 KCRLRKCLDIGMKSENIMSEEDKLIKRRKIETNRAKRRLMENGTDACDADGGEERDHKAPADS-- 123
Fly 124 SSSNLDHYSGSQDSQSCGSADSGANGCSGRQASSPGTQVNPLQMTAEKIVDQIVSDPDRASQAIN 188
Fly 189 RLMRTQKEAISVMEKV------------ISSQKDALRLVSHLIDYPGDALKI-ISKFMNSPFNAL 240
Fly 241 T--VF---TKFMSSPTDGVE--IISKIVDSPADVVEFMQNLMHSPEDAIDIMNKFMNTPAEALRI 298
Fly 299 LNRILSGGGANAAQQTADRKPLLDKEPAVKP-------------AAPAERADTVIQSMLGNSPPI 350
Fly 351 SPHDAAVDLQYHSPGV----GEQPSTSSS 375 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hr96 | NP_524493.1 | NR_DBD_CAR | 5..98 | CDD:143524 | 39/92 (42%) |
NR_LBD | 462..>573 | CDD:299703 | |||
NR_LBD_F1 | 523..702 | CDD:132727 | |||
raraa | XP_005156109.1 | NR_DBD_RAR | 72..156 | CDD:143522 | 36/83 (43%) |
NR_LBD_RAR | 177..406 | CDD:132735 | 50/284 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170593354 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |