Sequence 1: | NP_524493.1 | Gene: | Hr96 / 42993 | FlyBaseID: | FBgn0015240 | Length: | 723 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006251771.1 | Gene: | Thrb / 24831 | RGDID: | 3858 | Length: | 514 | Species: | Rattus norvegicus |
Alignment Length: | 344 | Identity: | 89/344 - (25%) |
---|---|---|---|
Similarity: | 132/344 - (38%) | Gaps: | 114/344 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SPPKN---------------CAVCGDKALGYNFNAVTCESCKAFFRRNALAKK---QFTCPFNQN 48
Fly 49 CDITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDKLIKRRKIETNRAKRR--------------- 98
Fly 99 -----LMENGTD---ACDADGGEERDHK--APADSSSSNLDHYSGSQDSQSCGSADSGANGCSGR 153
Fly 154 QASSPGTQVNPLQMT-----AEKI--------VDQIV-----------------SDPDRASQAIN 188
Fly 189 RLMRTQKEAISVMEKVISSQKDALRLVSHLIDYPGDALKIISKFMNSPFN------ALTVFTKFM 247
Fly 248 SSPTDG---VEIISKIVDS 263 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hr96 | NP_524493.1 | NR_DBD_CAR | 5..98 | CDD:143524 | 41/110 (37%) |
NR_LBD | 462..>573 | CDD:299703 | |||
NR_LBD_F1 | 523..702 | CDD:132727 | |||
Thrb | XP_006251771.1 | NR_DBD_TR | 159..245 | CDD:143519 | 36/86 (42%) |
NR_LBD_TR | 269..511 | CDD:132733 | 43/214 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166351556 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |