Sequence 1: | NP_524493.1 | Gene: | Hr96 / 42993 | FlyBaseID: | FBgn0015240 | Length: | 723 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001157172.1 | Gene: | Nr1h4 / 20186 | MGIID: | 1352464 | Length: | 488 | Species: | Mus musculus |
Alignment Length: | 436 | Identity: | 92/436 - (21%) |
---|---|---|---|
Similarity: | 157/436 - (36%) | Gaps: | 145/436 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 CAVCGDKALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVTRRFCQKCRLRKCLDIG 71
Fly 72 MKSENIMSEEDKLIKRRKIETNRAKRRLMENGTDACDADGGEERDHKAPADSSSSNLDHYSGSQD 136
Fly 137 SQSCGSADSGANGCSGRQASSPGTQVNPLQMTAEKIVDQIVSDPDRASQAINRLMRTQKEAISVM 201
Fly 202 EKVISSQKDALRLVSHLIDYPGDALKIISKFMNSPFNALTVFTKFMSSPTDGVEIISKIVDSPAD 266
Fly 267 VVEFMQNLMHSPEDAIDIMNKFMNTPAEAL-----RILNRILSGGGANAAQQTADRKPLLDKEPA 326
Fly 327 VKPAAPAERADTVIQSMLGNSPPISPHDAAVDLQYHSP------GVGEQPSTSSSHPL--PYIAN 383
Fly 384 SPDFD-LKTFMQTNYNDEPSLDSDFSINSIESVLSEVIRIEYQAFN 428 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hr96 | NP_524493.1 | NR_DBD_CAR | 5..98 | CDD:143524 | 37/90 (41%) |
NR_LBD | 462..>573 | CDD:299703 | |||
NR_LBD_F1 | 523..702 | CDD:132727 | |||
Nr1h4 | NP_001157172.1 | NR_DBD_FXR | 135..222 | CDD:143520 | 36/86 (42%) |
NR_LBD_Fxr | 264..483 | CDD:132734 | 48/278 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24082 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |