Sequence 1: | NP_524493.1 | Gene: | Hr96 / 42993 | FlyBaseID: | FBgn0015240 | Length: | 723 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002938868.2 | Gene: | rorb.2 / 100491456 | XenbaseID: | XB-GENE-922434 | Length: | 450 | Species: | Xenopus tropicalis |
Alignment Length: | 741 | Identity: | 133/741 - (17%) |
---|---|---|---|
Similarity: | 225/741 - (30%) | Gaps: | 341/741 - (46%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 CAVCGDKALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVTRRFCQKCRLRKCLDIG 71
Fly 72 MKSENIMSEEDKLIKRRKIETNRAKRRLMENGTDACDADGGEERDHKAPADSSSSNLDHYSGSQD 136
Fly 137 SQSCGSADSGANGCSGRQASSPGTQVNPLQMTAEKIVDQIVSDPDRASQAINRLMRT-QKEAISV 200
Fly 201 MEKVISSQKDALRLVSHLIDYPGDALKIISKFMNSPFNALTVFTKFMSSPTDGVEIISKIVDSPA 265
Fly 266 DVVEFMQNLMHSPEDAIDIMNKFMNTPAEALRILNRILSGGGANAAQQTADRKPLLDKEPAVKPA 330
Fly 331 APAERADTVIQSMLGNSPPISPHDAAVD-LQYH-SPGVGEQPSTSSSHPLPYIANSPDFDLKTFM 393
Fly 394 QTNYNDEPSLDSDFSINSIESVLSEVIRIEYQAFNSIQQAASRVKEEMSYGTQSTYGGCNSAANN 458
Fly 459 S-----QPHLQQPICAPSTQQLDRELNEAEQMKLRELRLASEALYDPVDEDLSALMMGDDRIKPD 518
Fly 519 DTRHNPKLLQLINLTAVAIKRLIKMAKKITAFRDMCQEDQVALLKGGCTEMMIMRSVMIYDDDRA 583
Fly 584 AWKVPHT---KENMGNIR------TDLLKFAEGNIYEEHQKF--ITTFDEKWRMDENIILIMCAI 637
Fly 638 VLFTSARSRVIHKDVIRLEQNSYYYLLRRYLESVYSGCEARNAFIKLIQKISDVERLNKFIINVY 702
Fly 703 LN-------VNPSQVE---PLLREIF 718 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hr96 | NP_524493.1 | NR_DBD_CAR | 5..98 | CDD:143524 | 30/90 (33%) |
NR_LBD | 462..>573 | CDD:299703 | 21/110 (19%) | ||
NR_LBD_F1 | 523..702 | CDD:132727 | 44/189 (23%) | ||
rorb.2 | XP_002938868.2 | NR_DBD_ROR | 3..97 | CDD:143526 | 36/154 (23%) |
NR_LBD | 199..438 | CDD:416257 | 62/331 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |