Sequence 1: | NP_524493.1 | Gene: | Hr96 / 42993 | FlyBaseID: | FBgn0015240 | Length: | 723 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002932450.2 | Gene: | rarb / 100488600 | XenbaseID: | XB-GENE-481009 | Length: | 447 | Species: | Xenopus tropicalis |
Alignment Length: | 417 | Identity: | 107/417 - (25%) |
---|---|---|---|
Similarity: | 168/417 - (40%) | Gaps: | 99/417 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SPP------KNCAVCGDKALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVTRRFCQ 60
Fly 61 KCRLRKCLDIGMKSENIMSEEDKLIKR-RKIETNRAKRRLMENGTDACDADGGEERDHKAPADS- 123
Fly 124 -SSSNLDHYSGSQDSQSCGSADSG--------ANGCSGR----QASSPGTQVNPLQMTAEKIVDQ 175
Fly 176 IVSDPDRASQAINRLMRTQKEAISVME--KVISSQKDALRLVSHLIDYPGDALKI-ISKFMNSPF 237
Fly 238 NALT--VFT---KFMSSPTDGVE--IISKI---------VDSPADVVEFMQNLMHSPEDAIDIMN 286
Fly 287 KFMNTPAEALRILNRI--LSGGGANAAQQTADRKPLLDKEPAVKPAAPAERADTVIQSMLGNSPP 349
Fly 350 ISPHDAAVDLQYHSPGVGEQPSTSSSH 376 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hr96 | NP_524493.1 | NR_DBD_CAR | 5..98 | CDD:143524 | 38/93 (41%) |
NR_LBD | 462..>573 | CDD:299703 | |||
NR_LBD_F1 | 523..702 | CDD:132727 | |||
rarb | XP_002932450.2 | NR_DBD_RAR | 75..159 | CDD:143522 | 34/83 (41%) |
NR_LBD_RAR | 179..409 | CDD:132735 | 54/269 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |