DRSC/TRiP Functional Genomics Resources

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Protein Alignment tnc and CHS5

DIOPT Version :10

Sequence 1:NP_651318.3 Gene:tnc / 42990 FlyBaseID:FBgn0039257 Length:2819 Species:Drosophila melanogaster
Sequence 2:NP_013434.1 Gene:CHS5 / 851041 SGDID:S000004322 Length:671 Species:Saccharomyces cerevisiae


Alignment Length:530 Identity:126/530 - (23%)
Similarity:203/530 - (38%) Gaps:114/530 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1753 EDENSSTDQIPSE---VPEKKPETPAQTPEEGDIVGATAAPTTSDE-------VPPVQRLPEEVL 1807
            ::|.|:.:.|.::   :|..:||.......|..|||.......:|:       .|||.   ||  
Yeast   221 DNEESNEELIRAKHNNIPIVRPEWVRACEVEKRIVGVRGFYLDADQSILKNYTFPPVN---EE-- 280

  Fly  1808 AEIPQPSTETGIKQQDETTAAPSIDRKEPYVTEIDEEATTVAPISEKDEKPTEEEKPVEQKPTGE 1872
                    |....:::|..|..:.:.|.|      |:.|.|..::..::   .|..|.|.|..||
Yeast   281 --------ELSYSKENEPVAEVADENKMP------EDTTDVEQVASPND---NESNPSEAKEQGE 328

  Fly  1873 EPSEEEEKEKPIEQDVSTEGPVSTEASEAGSTESS-EEVKPST---EGEVAEKP--EDKQPSSTA 1931
            :...|.....|:|..:        .||.|...|:: |.|.||.   :.|....|  |:.:..|:|
Yeast   329 KSGHETAPVSPVEDPL--------HASTALENETTIETVNPSVRSLKSEPVGTPNIEENKADSSA 385

  Fly  1932 QAPVETIPEISTELPAQDGDKPTSEAPVDSDEDTSAPSDEKIPS--VSGEEVEGPEVTTASPQAA 1994
            :|.||...|...|      ..|..||.....|||...|:|:..:  |..|||....:||.|  |.
Yeast   386 EAVVEEPNEAVAE------SSPNEEATGQKSEDTDTHSNEQADNGFVQTEEVAENNITTES--AG 442

  Fly  1995 EEDELKTPAESEPSSTDKVPETEYQKPEDETKADETPESVTQVSDVATSTSAPVAGGDIEKDEQA 2059
            |.:|   ||:.        ...|:.:||.|.:..|..||:...::.|..::.||           
Yeast   443 ENNE---PADD--------AAMEFGRPEAEIETPEVNESIEDANEPAEDSNEPV----------- 485

  Fly  2060 TTASPEEEEEIKPTIAPAAEIPQPSEKEPVDE--QEVESGTKATPAESDGQPIDEIAPATSGPID 2122
                   |:..||  ...:..|.....:||::  :.||...|  |.|...:|:::    ||.|::
Yeast   486 -------EDSNKP--VKDSNKPVEDSNKPVEDSNKPVEDSNK--PVEDANEPVED----TSEPVE 535

  Fly  2123 EASTAAPTKEESTTVASAASPAVHDDEI------KDVTTTQPVADEKEVAAPQDETKTSIDVSTD 2181
            :|  ..|.:|.:......|||...:::|      ||.|.:..|....|...|:::          
Yeast   536 DA--GEPVQETNEFTTDIASPRHQEEDIELEAEPKDATESVAVEPSNEDVKPEEK---------- 588

  Fly  2182 SPTAQDDEKQDKTEAPVAPTTVSSPTADSAADSSTPTVEVPSPVEIDTKPMDDIMSQTIAPHTAD 2246
            ...|:||......||....:|....|..||:..|:...|.....|.:.. .||::|...|.....
Yeast   589 GSEAEDDINNVSKEAASGESTTHQKTEASASLESSAVTEEQETTEAEVN-TDDVLSTKEAKKNTG 652

  Fly  2247 GAASTSTEDE 2256
            .:.|...:::
Yeast   653 NSNSNKKKNK 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tncNP_651318.3 VWC 47..105 CDD:450195
VWC 235..296 CDD:214564
LGT <469..641 CDD:469786
MDN1 484..1426 CDD:444083
PRK12323 <1240..1648 CDD:481241
MDN1 1523..2549 CDD:444083 126/530 (24%)
VWC 2762..>2805 CDD:450195
CHS5NP_013434.1 Chs5_N 4..76 CDD:260117
fn3_2 77..165 CDD:435634
BRCT_CHS5_like 172..255 CDD:349373 7/33 (21%)
PRK08581 290..>599 CDD:236304 94/382 (25%)
rne <446..618 CDD:236766 48/220 (22%)
Blue background indicates that the domain is not in the aligned region.

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