DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tnc and kcp

DIOPT Version :9

Sequence 1:NP_001247300.1 Gene:tnc / 42990 FlyBaseID:FBgn0039257 Length:2819 Species:Drosophila melanogaster
Sequence 2:XP_697494.6 Gene:kcp / 569039 ZFINID:ZDB-GENE-070705-443 Length:2200 Species:Danio rerio


Alignment Length:1451 Identity:276/1451 - (19%)
Similarity:402/1451 - (27%) Gaps:553/1451 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SEGCYYNYAHYQEGDRIMTNEPCLNCTCHNRMLMCYLRVCPFTKPIGHDCIVEKREDQCCPIITC 108
            |..|.:....|.:|: :.:.:.|..|.|.      |.||         :|.|..     ||..||
Zfish   362 SSECSFQSRIYSDGE-VFSPDECSRCKCE------YGRV---------ECDVNP-----CPSQTC 405

  Fly   109 PEVPVDVPYHSPEPGTELSIPEKFGCSIEEKFYPEGAQVPSNPNKPCELCYCINNQTKCVMQECT 173
            .|..|..|..|       .......|..|.:.|..|.:..|..| ||..|.|.|::..|...:|.
Zfish   406 EEPSVQRPCCS-------VCQTSLRCEHEGQVYENGHEFVSRSN-PCLSCICSNSRVSCNTIQCP 462

  Fly   174 LHVDGCLPIYNK-GSCCPVRYSCD-----HENELDFMDQSTTTT-------TTTVR--PTTGFIL 223
              ...|...|.: |.|||...:||     :......:|...|.|       ...|:  |.|   .
Zfish   463 --STPCPNPYRRPGECCPTCSACDVDGRPYNGSFSTVDGCQTCTCQGGNQECVDVQRCPQT---C 522

  Fly   224 ASTMTPP------TTTDCIHDGEIFADGASLK-GKNACEHCYCMRGDIVCAVQEC-EVPMMAANG 280
            ...:.||      ..:.|..||:|..||.|.: ..:.|:||.|..|:|||..:.| |:|      
Zfish   523 QDGVKPPFGSCCRDCSRCYFDGQIVLDGVSFQDSSDPCKHCVCSAGNIVCNPELCPELP------ 581

  Fly   281 KSCRAMPAAEGECCPSNYVC----------------EDDSSTTEIVE--ITTPESATSVPAKGIH 327
              |..:....|:|||....|                .|..||....|  |.......:||.:...
Zfish   582 --CTLLETVGGQCCPRCRSCVQENVWHLHGSQWRHPSDHCSTCTCTEGKIQCEHERCNVPCRNPA 644

  Fly   328 AEIPKEDVDLQEHIDDDDKNKETATIPSA-ELGSGEIEEEEEEKDKATTVAPVQVTDEKDFSFEP 391
            :..|.....:.|..     |.....:|:. .|.||.:.|.....:....:.              
Zfish   645 SPPPGSCCPVCEGC-----NLNGLDVPNGMPLPSGPVCEGSCRCENGNVIC-------------- 690

  Fly   392 ESSTAGIPSDSRIDLPSSTEESKESSTEAAEEDIVKIVTTP-----EPEGSGEEDVPKPSQ-IPE 450
                      .|:..|                      .||     .|.|   |..|:.:: :.|
Zfish   691 ----------DRLPCP----------------------PTPCYNPVTPPG---ECCPRCTECVYE 720

  Fly   451 KEITEDELI----------------KVSTSAPAKASPEEEVVTATTSAPTEEDVKPTT--AGTIS 497
            .|:.||...                :||...|..:.|     ..|.:.||    ||.|  ..|.:
Zfish   721 GEVYEDGQTFISRQDPCLRCQCLGGQVSCDPPGSSCP-----PPTCTHPT----KPPTQCCATCN 776

  Fly   498 EEEEEGKPTPAEEGSGEEEKD------VKVTAAPEET---EDEAKPTSAPVASDEKEQEPKPSEG 553
            ..|.||:    ..|.|||.:.      |..|......   ::...||:.||              
Zfish   777 TCEYEGR----IYGDGEEFRPPGGGPCVLCTCKGGNVRCHQERCPPTNCPV-------------- 823

  Fly   554 SGDEELDLKPTTAPTAGATSASEESEEQDEGKSTEAPTSVDDIEPAKPTESSEEASGEGEDVAKE 618
                     ||.||                                                ..:
Zfish   824 ---------PTPAP------------------------------------------------PNQ 831

  Fly   619 TTPAGEASIAGEEEIVKGTTPAGEPSSEGDE--EIVKGTTPAEESSSESEDELTKVTTPAGEPSV 681
            ..||....:....:..:|:|.|     :|::  ..|.|......:....|..|        ||.|
Zfish   832 CCPACRGCVWNNNQYEEGSTWA-----DGEQMCSCVAGQVTCRLNCPTPESCL--------EPIV 883

  Fly   682 AGEEEIAKETTPAGEPSIAGEEEIVKVTTPAGESSIAGEEEIVKVTTPAGESSSEGEEEIIKVTT 746
            .|.:              .|:.:..:.....|:|....::..|..|      ..:|:...:....
Zfish   884 TGGD--------------CGQCQYGEYVYENGQSFQDPQDPCVTCT------CQDGQTRCVLPAC 928

  Fly   747 PA----GESSSEGDEEIVKESTPAGEPISEGEEDVIKATTSAPKSDIEGVKEPETATEVPAEEVE 807
            ||    ...:|.|      |..|...|:.:.|.|....|..                       :
Zfish   929 PAVTCVNPYTSPG------ECCPRCPPVQDCEYDNRIITNG-----------------------D 964

  Fly   808 DFAKPTTPIAEAEEEPIAGTPIPTDG--ISGEEEIVK--------GTTPQTL--------EEQPE 854
            .|..|.....:.         :.|||  ..|..|..|        ||..|..        .|.| 
Zfish   965 TFPNPGNQCLDC---------VCTDGHVDCGNHECPKPNCNYPRPGTCCQNNCNGCNYAGNEYP- 1019

  Fly   855 ISEESTEVPVAEDD--LSSSTSAS---------AIASSTEGVQDAASETTSSAPARAGD------ 902
               ...|.|...|:  :...|:.:         |:......||  |.|.....||...|      
Zfish  1020 ---NGMEFPHPVDNCRMCRCTNGNVQCLMKRCPAVHCDNSFVQ--AGECCRQCPAPPADCIVEEQ 1079

  Fly   903 --KDEAATTVPTAQDKDDEEVEQDATDLPVEDVVQSTTAKTTTTEQPKEESSTEAEDAEIEVTTS 965
              :.....:.||                   |..||.|. |..|...:......|       |.|
Zfish  1080 SYRHMQRFSHPT-------------------DSCQSCTC-TNGTPSCRRRPCPSA-------TCS 1117

  Fly   966 SPADKQ-----------------EVPEAEPAD-------KD-----HKDEEDVQTATDLPIKSDI 1001
            .|..::                 ....|:|:|       :|     |.::.. :.|...|::...
Zfish  1118 HPIIQECCRTCDGCLYHGREHANGATFADPSDSCRTCVCRDGTVTCHSNQCQ-RIACPFPVQDQC 1181

  Fly  1002 GP-----PVVDTEATTGQ--PETSDE-----------TATDKPPSVYLPPGGEKDTEKEDETTAT 1048
            .|     .....|...||  .:.||.           |...||..   .||....|.:.|:....
Zfish  1182 CPHCNGCMYAGVEYLNGQEFADPSDHCAHCICSNGHVTCNTKPCH---NPGCTYPTTRPDQCCPV 1243

  Fly  1049 EPSVQEEPSKPVDISPVSQEVPSSTAKVD----NRNDFETEKPTLP------------------- 1090
            ....|.|....||    .:..||||...:    :|.:.|....:.|                   
Zfish  1244 CDGCQFEGRVYVD----GELFPSSTTSCEECRCSRGEVECSPKSCPIVSCPHPERDPCLCPVCEG 1304

  Fly  1091 --------------PSGEDQ-----------SSEPLPAMDL----PAGIPGE------GDCLVEG 1120
                          |...|.           |..|:...::    |...|||      |.|...|
Zfish  1305 CQFNGRDCGNGERFPDPSDPCRSCACLDGSVSCSPVSCPEVFCKRPVRPPGECCPVCSGTCEHLG 1369

  Fly  1121 KTYAN-NTIVPATAPCDVSCKCISSLVACQQMECKLPENLEKCT--VAADLLDGCCPTYICDEST 1182
            :.|.: :|.:||...|. :|.|:|.:|.|::..|.     :|||  |...|   |||  :||...
Zfish  1370 QVYEDASTFIPADDRCS-TCTCLSGVVLCEKKMCS-----KKCTHPVRTRL---CCP--VCDACL 1423

  Fly  1183 ESAEK--DEESTAKPDNKI------DEDVSEISTEEIPKDVIMPTGITEQPLSHVKPDEEIQPVT 1239
            ...:|  :.||...|.:..      |..||       ...:..|....:.|::   |..:..|..
Zfish  1424 YEDKKYRNTESFIDPWDPCRTCVCRDGSVS-------CSAITCPAVSCQNPIT---PAGKCCPEC 1478

  Fly  1240 SVPAQFD------ESTTAKVD 1254
            .|..|:|      ||.|...|
Zfish  1479 RVCVQYDQQYVDGESLTLPAD 1499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tncNP_001247300.1 VWC 235..296 CDD:214564 22/62 (35%)
PHA02664 <433..595 CDD:177447 36/189 (19%)
Ehrlichia_rpt 529..1065 CDD:118064 99/625 (16%)
DUF863 <1684..>1788 CDD:283539
VWC 2762..>2805 CDD:302663
kcpXP_697494.6 LamG 38..>188 CDD:304605
VWC 365..418 CDD:302663 19/80 (24%)
VWC 424..480 CDD:302663 19/58 (33%)
VWC 540..596 CDD:302663 23/63 (37%)
VWC 599..655 CDD:302663 9/55 (16%)
VWC <681..714 CDD:302663 8/81 (10%)
VWC 778..836 CDD:302663 18/132 (14%)
VWC 891..947 CDD:302663 11/67 (16%)
VWC 1305..1361 CDD:302663 8/55 (15%)
VWC 1422..1478 CDD:302663 11/65 (17%)
VWC 1598..1663 CDD:302663
VWC 1803..1860 CDD:278520
VWD 1867..2016 CDD:278521
C8 2059..2128 CDD:285899
TIL 2139..2192 CDD:280072
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46698
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.