DRSC/TRiP Functional Genomics Resources

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Protein Alignment tnc and CG1647

DIOPT Version :9

Sequence 1:NP_001247300.1 Gene:tnc / 42990 FlyBaseID:FBgn0039257 Length:2819 Species:Drosophila melanogaster
Sequence 2:NP_651636.1 Gene:CG1647 / 43401 FlyBaseID:FBgn0039602 Length:1222 Species:Drosophila melanogaster


Alignment Length:1411 Identity:280/1411 - (19%)
Similarity:486/1411 - (34%) Gaps:369/1411 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1271 SEEDSKPIDESEEDKKPVE-----ESAEDKKPVEDSEEKEKPLPTVIPASEIEKESKPEDEKKTE 1330
            :|||:..:||....:|..|     .|.:||            :|..|.:..::|.:         
  Fly    37 NEEDTIDLDEPRMSQKIYELVGFTVSVDDK------------MPQTICSQCVDKIN--------- 80

  Fly  1331 ADFAAPTEQPEATTPAQIADTAEKEVDDKLATTSAPVSGEDELKPADEKKRTETAQIPDAEIPAS 1395
             ||....|...||         .|:..:.|..                 |:.|.|::.|.:....
  Fly    81 -DFYEFREMCYAT---------NKQTRNLLGL-----------------KQIEPARLIDLKRIVK 118

  Fly  1396 TDEPESSTELPTVDLDKKPEEDSTKGTEA-PESDKV-PEVPTSASTENEIEESDKFTTVAPPKI- 1457
            .:.|.|..      :.|:..:  .||.|: |:::.| |:|...:...::.::      :.|.:| 
  Fly   119 EERPISGA------VGKRGRK--RKGEESWPKNNNVKPQVKKESFVWHKKQK------LQPSQIT 169

  Fly  1458 SASDETEPTAEEDLVPATFEPIESEFEVSTKKPAVQGPPLPTLAPAQPEKK-------PVDAETS 1515
            |...:.||..::       ||.|.:       .:::|||          ||       .|..|..
  Fly   170 SLVSKREPEIKD-------EPAEQD-------TSLKGPP----------KKAGRKSICSVCGEKF 210

  Fly  1516 TEADISTEPSAEVEK--------EASGETSESDNEIDA-----GASSTPVPVSADEDKTPSTEKT 1567
            ...:::.|..:.|..        .|..:|..:.::|.|     ..|.||.       |.|..|.:
  Fly   211 LSKELADEHKSLVHVPSIPRYICNACNQTHHNQSDIRAHQLWHKLSKTPY-------KCPLCESS 268

  Fly  1568 VEADDKFTTVAPLAGDEEESNLPKLPQD--IFEEEAPVAVTTAAPS-------------KDDGEQ 1617
            |.....||.       ....:.|..|..  :.:.|.|:...|...:             |..|..
  Fly   269 VANAYAFTR-------HLREHTPPTPVQLLVLDRECPLCKKTFVTNFFYNTHRCAIRKRKCGGCS 326

  Fly  1618 KPVEVE----------EKPIEDGQKPIEDETSTPTSS---ENEIEPE---SDRATTIAPS--KEE 1664
            :.:..|          .|...:..|.|..:..|..:.   :||||.|   ...|||:.|.  .:|
  Fly   327 RTLNTEAAYMRHAPTCPKIYLNHSKHIMPQVVTNEAQMLIKNEIEEELLGLPPATTVPPDFVIDE 391

  Fly  1665 PSEPSTGAPTKDEP---AEPSTDAPESDESKETPESEVPTTVAPAGEKIPTSSIT-------PDE 1719
            ..:|.........|   :...||...:.:||.:........:....:.:..:..|       |:.
  Fly   392 GMQPVVVLERLSSPLLRSSSGTDQLVAAKSKNSDRVSARNYLKRVDQLLKNTINTLVSIKHEPEV 456

  Fly  1720 EPTATSAPVAKPDEDVEKETSTEIPTDAPASSEEDENSSTDQIPSEVPEKKPETPAQTPEEGDIV 1784
            ....|..|..:.:.|.|.|.:.|.|     |..:|..::.|    |..|.:|||      |.|.:
  Fly   457 HINDTGPPRGQAESDPEPERNEEHP-----SFGDDIQAAND----ECQECQPET------ESDKI 506

  Fly  1785 GATAAPTTSDEVPPVQRLPEEVLAEIPQPSTETGIKQQDETTAAPSIDRKEP------------- 1836
            ...|.    |::|.|....|   .|......:||:||             ||             
  Fly   507 SVAAC----DDIPSVSVKQE---PEYDGYEKQTGVKQ-------------EPLKLKLKITKNHGK 551

  Fly  1837 ----YVTEIDEEATTVAPISEKDEKPTEEEKPVEQKPTGEEPSEEEEKEKPIEQDVSTEGPVSTE 1897
                .:.::||........|:|.:|                     .|.|..|::.|.|      
  Fly   552 LNSSLIDDLDEAGQAFGRSSKKKKK---------------------RKHKEREKEASNE------ 589

  Fly  1898 ASEAGSTESSEEVKPSTEGEVAEKPEDKQPSSTAQAPVETIP--EISTELPAQDGDKPTSEAPVD 1960
             :|...|||..:  |:.  ::.::|.|..|.:|.   :.|||  :..:.|...:..:...||.:.
  Fly   590 -TENCRTESQNQ--PAI--KIKQEPVDYAPEATV---MTTIPMTQFESSLNESERSEEVDEAMIQ 646

  Fly  1961 SDEDTSAPSDE-----KIPSV-SGEEV-EGPEVTTASPQAAEEDEL---KTPAESEPSSTDKVPE 2015
            |.||......|     :|.:| ||.:: |.......:.:|..||.|   |:...:...||.....
  Fly   647 SQEDVKPNRMELDRMMQISNVTSGVDMAEEAMALERAEEACPEDSLHKVKSVKSTARKSTGGAER 711

  Fly  2016 TEYQKPEDETKADETPESVTQVSDVATSTSAPV-------AGGDIEKDEQATTASP-------EE 2066
            ..|..|...|    .|:.|..||..:......:       ..||.|.::|..|...       ||
  Fly   712 KTYSPPRTNT----LPQIVAVVSGESAFNMISIKPEPRNLGYGDEEPEDQRETTEEINHNDMMEE 772

  Fly  2067 EEEIKPTIAPAAEIPQPSEKEPVDEQEVE----SGTKATPAESDGQPIDEIAPATSGPIDEASTA 2127
            |:|...:: ..:::....|:| :|..|::    :|.:.:..:.|....|..:.|     |||..|
  Fly   773 EKEYIGSL-DLSDVSVKQERE-LDICEIDAVHRNGLEKSDEDDDDGNEDSASSA-----DEAEEA 830

  Fly  2128 APTKEESTTVASAASPAVHDDEIKDVTTTQPVADEKEVAAPQDETKTSIDVSTDSPTAQDD---- 2188
            .....|.........|.:   |:::.::.:.:..|:    ...|..|::..| ::|:...|    
  Fly   831 MERDTEERIYREIELPPL---ELQNESSRKDLESER----MDTEVSTALPAS-ETPSQTRDVLGV 887

  Fly  2189 EKQDKTEAPVAPTTVSSPTADSAADSSTPTVEV---PSPVEIDTKPMDDIMSQTIAP--HTADGA 2248
            ||.:.:...:..|.:.|......:.:.:..:|.   |||            |.|..|  ||.:..
  Fly   888 EKSEASAFSLVITNICSQAVPQPSAACSNDIECSIGPSP------------STTNEPHSHTVENV 940

  Fly  2249 ASTSTEDEDQAPVTVSPQDAEKTPVSPAPQDSDKTPSSEAPQDADEIPATATPL---DDNKIPAT 2310
            .|.:.:.:..|.|.::.|......:...|     ..|||:..|..::|..|:.:   :...:|..
  Fly   941 QSPANDLQTSAQVAIAAQSQPDPCIVSQP-----AASSESQADTKDLPPAASQIQTFNTESLPIH 1000

  Fly  2311 VAPQTDDGVPATAAPLDEDKIQTTAAPLDEEKIPSTAAPLDDEKIPAP--VSPVVFDVEPSSEKP 2373
            |..:|:|......|...|.:.|........|. ||.... .:|.:|:.  |||:     |.:..|
  Fly  1001 VHSETEDNSIENDASYLESRAQVDCQSAGTEN-PSVVLE-QNESLPSGSCVSPI-----PENPSP 1058

  Fly  2374 AVSEYDGEESTEPPVHDVETSTDEPTSDAKLKPPTSAPATPS-ESPA-TEAEIVPETAAPELEKE 2436
            ..|         ||.||...|.|:|...|   ......||.| ::|. |||..:|...|..::..
  Fly  1059 GNS---------PPQHDESESLDKPEMAA---GSAYCLATVSLDAPKDTEALALPPCDAAIIDSN 1111

  Fly  2437 VPEKATEQPELEKETPEKATEQPELEKETPEKATEQPELEKETPEKATEQPELEKEVTDKATEQP 2501
            ......:|..|..|..|:  :...:|........|||.|.:..|...:.:|..|.|  ::..||.
  Fly  1112 YTSDEEQQNVLNHELSEQ--QLAIMEHRQLLVHEEQPALLEVIPPGLSSRPIEETE--NRINEQQ 1172

  Fly  2502 ESVDEKTTPEPVVKPSLDSTEEDEESVESEEESADKKDKNKETEED 2547
            :.:::.....|..:.:      |:.::....|:.:..:..:|.::|
  Fly  1173 QDLEQGEERPPRFQAN------DDSNINEIAENNNNANIERELQDD 1212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tncNP_001247300.1 VWC 235..296 CDD:214564
PHA02664 <433..595 CDD:177447
Ehrlichia_rpt 529..1065 CDD:118064
DUF863 <1684..>1788 CDD:283539 22/110 (20%)
VWC 2762..>2805 CDD:302663
CG1647NP_651636.1 zf-AD 19..99 CDD:285071 19/92 (21%)
C2H2 Zn finger 203..224 CDD:275368 3/20 (15%)
C2H2 Zn finger 233..253 CDD:275368 4/19 (21%)
C2H2 Zn finger 262..282 CDD:275368 5/26 (19%)
C2H2 Zn finger 297..314 CDD:275368 2/16 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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