DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tnc and Cp190

DIOPT Version :9

Sequence 1:NP_001247300.1 Gene:tnc / 42990 FlyBaseID:FBgn0039257 Length:2819 Species:Drosophila melanogaster
Sequence 2:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster


Alignment Length:1180 Identity:234/1180 - (19%)
Similarity:404/1180 - (34%) Gaps:321/1180 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1438 STENEIEESDKFTTVAPPKISASDETEPTAEEDLVPATFEPIESEFEVSTKKPAVQGPPLPTLAP 1502
            ||.|.:..:...:..:|...|::.:.|||       :.||.:...:. :.|:||    ....|:|
  Fly   182 STGNTMSRTSGGSNRSPYGDSSNVKQEPT-------SPFEQLRKGYN-NNKRPA----QTSLLSP 234

  Fly  1503 AQPEKKPVDAETSTEADISTEPSAEVEKEASGETSESDNEIDAGASSTPVPVSADEDKTPSTEKT 1567
              |.|||...|....|:     ...:.|:.:.|..::|.|.|.|                     
  Fly   235 --PSKKPSLEEVKEFAE-----QQRMRKQIAAEYGDNDPEYDGG--------------------- 271

  Fly  1568 VEADDKFTTVAPLAGDEEESNLPKLPQDIFEEEAPVAVTTAAPSKDDGEQKPVEVEEKPIEDGQK 1632
            :..||..      |||:::.::|  ||                                      
  Fly   272 MLYDDVH------AGDDDDDDMP--PQ-------------------------------------- 290

  Fly  1633 PIEDETSTPTSSENEIEPESDRATTIAPSKEEPSEPSTGAPT---KDEP----------AEPSTD 1684
            |...:..:|..::.::|..|   |||...::.||:    .||   ||..          ||....
  Fly   291 PSTSKQQSPQGTQTQLEHGS---TTIILKQDSPSQ----TPTIIVKDSSNAKLNHTKIIAEVLRQ 348

  Fly  1685 APESDESKETPESEV-PTT-VAPAGEKIPTSSITPDEEPTATSAPVAKPDEDVEKETSTEIPTDA 1747
            .|...:..:..:.:: |.| .||..:..|.:...|..:.:||::|..|.....:.:.||.:.|..
  Fly   349 YPHIVKGHKNIKLKIMPNTPAAPTEKSAPATVKPPANQSSATTSPHKKLHVSFKADKSTPLITAQ 413

  Fly  1748 PASSEEDENSSTDQIPSEVPEKKPETPAQTPEEGDIVGATAAPTTSDEVPPVQRLPEEVLAEIPQ 1812
            ..::...:.|.|.|....                  .|..|.|..:......:|:..:.:..:  
  Fly   414 QKAASSQQKSGTSQTTGN------------------QGTGANPPANTAAAQKRRIDSKTMHAL-- 458

  Fly  1813 PSTETGIKQQDETTAAP------SIDRKEPYVTEIDEEATTVAPISEKDEK-------PTEEE-- 1862
                  |.|..|.|..|      .::.:               |||....:       .|.:|  
  Fly   459 ------IAQGAENTTGPWLCLRCGVNGR---------------PISIPSYRGFRRHLINTHKETI 502

  Fly  1863 KPVEQKPTGEEPSEEEEKEKPIEQDVSTEGPVSTEASEAGSTESSEEVKPSTEGEVAE--KPEDK 1925
            .|...:..|.......|....:..:..|:..:.|.| |......|...|...|..:.|  ..::|
  Fly   503 DPALCEHCGWRSVNNRELHFHMYMEHQTKSLLYTFA-ECALCNQSYRTKGELEAHINEVHTDDNK 566

  Fly  1926 QPSSTAQAPVETIPEISTELPAQDGDKPTSEAPVD-SDEDTSAPSDEKIPSVSGEEVEGPEVTTA 1989
            |.........|...::...:.:...::...:..:| :||:.....||:      ||.||.|    
  Fly   567 QQCIYCNKVFEQELQLYRHMKSYHKEQALEDGIIDETDEEFLGSQDEE------EEAEGDE---- 621

  Fly  1990 SPQAAEEDELKTPAESEPSSTDKVPETEYQKPEDETKADETPESVTQVSDVATSTSAPVAGGDIE 2054
                          |.||..|.|                     |..:||::...::.:.....:
  Fly   622 --------------EQEPEQTGK---------------------VRILSDISLPATSAITVQQAQ 651

  Fly  2055 KDEQATTASPEEEEEIKPTIAPAAEIPQPSEKEPVDEQEVESGTKATPAESDGQPIDEIAPATSG 2119
            :::.......:.::|:|...|...|:      |..|||..|..::....:         |.||:|
  Fly   652 QEQLQEEDVEQVQQEVKFVGADGNEV------ELTDEQRKEILSQLNQQQ---------AGATAG 701

  Fly  2120 PID---EASTAAPTKEESTTVASAASPAVHDDEIKDVTTTQPVADEKEVAAPQ--DETKTSID-- 2177
            .:.   ....|...|:|:...:.|.:...:||  ..:.:....||..|.|...  ||:|.|||  
  Fly   702 GVVMVLSEPEAEHVKQETDEKSLAGTEEEYDD--SQIYSELGAADSVESAKKNIADESKESIDNL 764

  Fly  2178 VSTDSPTAQDDEKQDKTEAPVAPTTVSSPTADSAADSSTPTVEVPSPVEIDTKPMDDIMSQTIAP 2242
            ...::..|:.:|:.:|           .|.:|                    ||.||| |:.:..
  Fly   765 EWAENLIAESEEQSNK-----------EPKSD--------------------KPRDDI-SEKLKE 797

  Fly  2243 HTADGAASTSTEDEDQAPVTVSPQDAEKTPVSPAPQDSDKTPSSEAPQDADEIPATATPLDDNKI 2307
            .|.|.     ||||:...|...|..||.     |.:.::|.|.....::.|:|......|.....
  Fly   798 LTGDW-----TEDENDDDVDDKPATAEL-----ASELANKDPEPTVHEEEDDIDLALQSLHKGPE 852

  Fly  2308 PATVAPQTDDGVPATAAPLDEDKIQTTAAPLDEEKIPSTAAPLDDEKIPAPVSPVVFDVEPSSEK 2372
            .||....:::.|  |:|....|.:....:..::..:.|.||   |||        ....|...:|
  Fly   853 EATEEKASEESV--TSADDAVDAVPNINSQPEKMDVDSEAA---DEK--------ASKAEVQIKK 904

  Fly  2373 PAVSEYDGEE--STEPPVHDVETSTDEPTSDAKLKPPTSAPATPSESPA-TEA---------EIV 2425
            .|..|.|.||  ..:.|:         |.||:..:...:..|:..|... .||         |::
  Fly   905 EAELENDQEEFIKEDSPI---------PHSDSVAELREAVTASEGEDDVHLEADNIRKELLDELI 960

  Fly  2426 PETAAPELEKEVPEKATEQPELEKETPEKATEQPELEKETPEKATEQPELEKETPEKATEQPELE 2490
            .|...|:.||::.:  :|:....:......|::.:|...| :.:|||.|:::...|||.|..|..
  Fly   961 AEAEKPDQEKDIVQ--SEENATTEALDRSVTDEDDLVPPT-QVSTEQMEIDEPAAEKAAENNEDT 1022

  Fly  2491 KEVTDK--ATEQPESVDEKTTPEPVVKPSLDSTEEDEESVESEEESADKKDKNKETEEDTDKKHE 2553
            :...:|  ..::|....:.||.|   ||:|:|.:..:|:...|..|.||.........|.|:..:
  Fly  1023 RTADEKEAVEDKPNQTQDVTTAE---KPTLESAKAGDEATSGEAASVDKVKSLISEWGDDDEDED 1084

  Fly  2554 EPEVPAVVSE 2563
            |..|.|...|
  Fly  1085 ENGVSAAAKE 1094

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tncNP_001247300.1 VWC 235..296 CDD:214564
PHA02664 <433..595 CDD:177447
Ehrlichia_rpt 529..1065 CDD:118064
DUF863 <1684..>1788 CDD:283539 18/105 (17%)
VWC 2762..>2805 CDD:302663
Cp190NP_524359.2 BTB 20..122 CDD:279045
BTB 31..127 CDD:197585
C2H2 Zn finger 540..568 CDD:275371 5/27 (19%)
C2H2 Zn finger 569..586 CDD:275371 1/16 (6%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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