DRSC/TRiP Functional Genomics Resources

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Protein Alignment tnc and leo1

DIOPT Version :9

Sequence 1:NP_001247300.1 Gene:tnc / 42990 FlyBaseID:FBgn0039257 Length:2819 Species:Drosophila melanogaster
Sequence 2:NP_996950.1 Gene:leo1 / 404599 ZFINID:ZDB-GENE-040426-2435 Length:696 Species:Danio rerio


Alignment Length:830 Identity:169/830 - (20%)
Similarity:292/830 - (35%) Gaps:229/830 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 TEEDVKPTTAGTISEEEEEGKPTPAEEGSGEEEKDVKVTAAPEETEDEAKPTSAPVASDEKEQEP 548
            ::.:.:.:.:|:.|:.:.| :|..|...||.|..........:|.||..||::..:..|:.|.| 
Zfish    14 SDNEQRDSGSGSGSDSDHE-RPRSASNASGSESAQSDRDHDDDEDEDGGKPSNKELFGDDSEDE- 76

  Fly   549 KPSEGSGDEELDLKPTTAPTAGAT------SASEESEEQDE--GKSTEAPTSVDDIEPAKPTESS 605
            ..|:.||.:....:.:.:..:|:.      |.|:.|..|.|  |..::|....|:..........
Zfish    77 HGSQHSGSQHSGSRHSGSRHSGSRHSGSRHSGSQHSGSQSERSGNQSDATMHSDNEHSMSEAHRG 141

  Fly   606 EEASGEGEDVAKETTPAGEASIAGEEEIVKGTTPAGEPSSEGDEEIVKGTTPAEESSSESEDELT 670
            |:...:.:|....:.....||.||.....:|   :|.|.||..       :|..|:.|...|   
Zfish   142 EQDDEDDDDRGHRSDVGSPASGAGSRRSDRG---SGSPGSEAG-------SPRSEAGSGHSD--- 193

  Fly   671 KVTTPAGEPSVAGEEEIAKETTPAGEPSIAGEEEIVKVTTPAGESSIAGEEEIVKVTTPAGESSS 735
                 .|.|...||        .:|:.:.:|:|:    ....|:|..:.:|:        .:.:|
Zfish   194 -----PGTPHTDGE--------GSGKDAHSGDEK----WGGDGKSDQSEDED--------KQQNS 233

  Fly   736 EGEEEIIKVTTPAGESSSEGDEEIVKESTPAGEPISEGEEDVIK------ATTSAPKSDIE--GV 792
            :.|.|         .|..||:.:  |..:..|   |:.|:|..:      |:.|...||.|  |.
Zfish   234 DDERE---------RSDEEGERQ--KSESIKG---SDSEDDFTRKKKKKIASDSDSDSDAETQGG 284

  Fly   793 KEPET------ATEVPAEEVEDFAKPTTPIAEAEEEPIAGTPIPT-DGISGEEEIVKGTTPQTLE 850
            |:|..      |.::.::  .|..||.||          |.|:.. ||:.|::       |:. |
Zfish   285 KKPAANDLFGEADDISSD--SDAEKPLTP----------GQPLDADDGMEGDQ-------PEE-E 329

  Fly   851 EQPEISEESTEVPVAEDDLSSSTSASAIASSTEGVQDAASETTSSAPARAGD----KDEAATTVP 911
            ..||...| .|:|....||.|......:.:..            |...|..|    :||.     
Zfish   330 PAPETRIE-VEIPKVSTDLGSDLYFVKLPNFL------------SVEPRPFDPQYYEDEF----- 376

  Fly   912 TAQDKDDEEV--EQDAT--DLPVEDVVQSTTAKTTTTEQPKEESSTEAEDAEIEVTTSSPADKQE 972
                 :|||:  |:..|  .|.||:.::..:.:.....:.||.::...:.::..::.....:..:
Zfish   377 -----EDEEMLDEEGRTRLKLKVENTIRWRSRRDEEGNEVKESNARIVKWSDGSMSLHLGNEVFD 436

  Fly   973 VPEAEPADKDHKDEEDVQTATDLPIKSDIGPPVVDTEATTGQPETSDETATDKPPSVYLPPGGEK 1037
            |.:| |...|| :...::..|.|.     |..|..|:.|. :|.::| :||.:..::.|      
Zfish   437 VYKA-PLQGDH-NHLFIRQGTGLQ-----GQAVFKTKLTF-RPHSTD-SATHRKMTLSL------ 486

  Fly  1038 DTEKEDETTATEPSVQEEPSKPVDISPVSQEVPSSTAKVDNRND-FETEKPTLPPSGEDQSS--- 1098
                .|..:.|:         .:.|.|::...|.|     .||: .:.|:..|..|...:|.   
Zfish   487 ----ADRCSKTQ---------KIRILPMAGRDPES-----QRNEMIKKEEERLRASIRRESQQRR 533

  Fly  1099 --EPLPAMDLPAGI--PGEGDCLVEGKTYANNTIVPATAPCDVSCKCISSLVACQQMECKLPENL 1159
              |......|.||.  |...|...||:.             .:|...|.|               
Zfish   534 MREKQHQRGLNAGYLEPDRYDEDEEGEE-------------SISLAAIKS--------------- 570

  Fly  1160 EKCTVAADLLDGCCPTYICDESTESAEKDEESTAKPDNKIDEDVSEISTEEIPKDVIMPTGITEQ 1224
             |......|.:.....|..| |.|.:::|:........::|.                       
Zfish   571 -KYKGGGGLREERARIYSSD-SDEGSDEDKAQRLMKAKRLDS----------------------- 610

  Fly  1225 PLSHVKPDEEIQPVTSVPAQFDESTTAKVDKKPIDESAEDKKPIGESEED 1274
                   |||.:......|:.||.:.:|..||.:....||:...||.:.|
Zfish   611 -------DEEGENSGKRKAEEDEESASKKPKKYVISDEEDEDGDGERDGD 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tncNP_001247300.1 VWC 235..296 CDD:214564
PHA02664 <433..595 CDD:177447 27/118 (23%)
Ehrlichia_rpt 529..1065 CDD:118064 118/566 (21%)
DUF863 <1684..>1788 CDD:283539
VWC 2762..>2805 CDD:302663
leo1NP_996950.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..336 87/395 (22%)
PHA02664 <161..260 CDD:177447 33/150 (22%)
Leo1 352..510 CDD:281933 37/212 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..560 8/33 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..696 20/101 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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