DRSC/TRiP Functional Genomics Resources

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Protein Alignment tnc and Kcp

DIOPT Version :10

Sequence 1:NP_651318.3 Gene:tnc / 42990 FlyBaseID:FBgn0039257 Length:2819 Species:Drosophila melanogaster
Sequence 2:XP_038964921.1 Gene:Kcp / 296952 RGDID:1561119 Length:1671 Species:Rattus norvegicus


Alignment Length:394 Identity:86/394 - (21%)
Similarity:132/394 - (33%) Gaps:132/394 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TRRRSSPPGLEELLYLALVLLAMILIPTQAAPVQEYTEIQQYSEGCYYNYAHYQEGDRI--MTNE 64
            |||...||.....|          ::|....|.         .:||.|:......|:.:  ..:.
  Rat   937 TRRPCEPPACSHPL----------ILPKHCCPT---------CQGCLYHGITAALGETLPDPLDP 982

  Fly    65 PCLNCTCHNRMLMCYLRVCP------------FTKPIGHDCIVEKREDQ---------------- 101
            .|..|||....:.|:.:.||            |. |:...|:.:.:|.|                
  Rat   983 TCSLCTCEEGSMRCHKKPCPPALCTHPSPGPCFC-PVCRSCLFQGQEHQDGEEFEGPEGSCERCR 1046

  Fly   102 C------CPIITCPEVPVDVPYHSPEPGTELSIPEKFGCSIEEKFYPEGAQ-VPSNPNKPCELCY 159
            |      |..:.||.:|..:  .:.||||  ..|...||.:..:.:|||:. ||:  :.||..|.
  Rat  1047 CLAGQVSCMRLQCPPLPCLL--QATEPGT--CCPRCTGCRVRGEEHPEGSSWVPA--DSPCSSCM 1105

  Fly   160 CINNQTKCVMQECTLHVDGCL-PIYNKGSCCPVRYSCDHENELDFMDQSTTTTTTTVRPTTGFIL 223
            |......|...:|   |..|: |......|||   ||                            
  Rat  1106 CHKGIVTCAQVQC---VSACIWPQQGPSDCCP---SC---------------------------- 1136

  Fly   224 ASTMTPPTTTDCIHDGEIFADGASLK-GKNACEHCYC-MRG----DIVCAVQECEVPMMAANGKS 282
                     :.|.|:|..:..|.|.: |.:.||.|.| ::|    .:.|..::|  |.:.....|
  Rat  1137 ---------SGCEHEGRKYEPGESFQPGDDPCEVCICELKGKGPPSLHCRRRQC--PSLVGCPPS 1190

  Fly   283 CRAMPAAEGECCP------SNYVCEDDSSTTEIVEITTPESATSVPAKGI-----HAEIPKEDVD 336
             :.:|.....|||      ||  |.:|...:|:|   .|:...:...:.:     |...|.....
  Rat  1191 -QLLPPGPQHCCPACAQALSN--CTEDLLGSELV---PPDPCYTCQCQDLTWLCTHRACPALSCP 1249

  Fly   337 LQEH 340
            |.||
  Rat  1250 LWEH 1253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tncNP_651318.3 VWC 47..105 CDD:450195 17/93 (18%)
VWC 235..296 CDD:214564 19/72 (26%)
LGT <469..641 CDD:469786
MDN1 484..1426 CDD:444083
PRK12323 <1240..1648 CDD:481241
MDN1 1523..2549 CDD:444083
VWC 2762..>2805 CDD:450195
KcpXP_038964921.1 VWC 227..281 CDD:278520
VWC 285..341 CDD:450195
VWC 405..460 CDD:450195
VWC 608..664 CDD:450195
VWC 725..781 CDD:450195
VWC 1022..1078 CDD:450195 13/59 (22%)
VWC 1139..1204 CDD:450195 19/67 (28%)
VWC <1223..1264 CDD:450195 6/31 (19%)
VWC 1271..1328 CDD:450195
VWD 1335..1484 CDD:459671
C8 1527..1599 CDD:214843
TIL 1610..1663 CDD:410995
Blue background indicates that the domain is not in the aligned region.

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