DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tnc and Dmp1

DIOPT Version :9

Sequence 1:NP_001247300.1 Gene:tnc / 42990 FlyBaseID:FBgn0039257 Length:2819 Species:Drosophila melanogaster
Sequence 2:NP_001345942.1 Gene:Dmp1 / 13406 MGIID:94910 Length:503 Species:Mus musculus


Alignment Length:667 Identity:134/667 - (20%)
Similarity:223/667 - (33%) Gaps:238/667 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  1474 ATFEPIESEFEVSTKKPAVQGPPLPTLAPAQPEKKPVDAETSTEADISTEPSAEVEKEASGETSE 1538
            |.:...|||............||.||           ::|:|.|:..|.|..|..:..   ::||
Mouse    20 ARYHNTESESSEERTGDLAGSPPPPT-----------NSESSEESQASPEGQANSDHT---DSSE 70

  Fly  1539 SDNEI--------DAGASSTPVPVSADEDKTPSTEKTVEADDKFTTVAPLAGDEEESNLPKLPQD 1595
            |..|:        .||..|......||::    .::....||.|       |||:        .|
Mouse    71 SGEELGYDRGQYRPAGGLSKSTGTGADKE----DDEDDSGDDTF-------GDED--------ND 116

  Fly  1596 IFEEEAPVAVTTAAPSKDDGEQKPVEVEEKPIEDGQKPIEDETSTPTSSENEIEPESDRATTIAP 1660
            :..||.    ....|||.|.:                  ||.|.|..|||:....|:....|.:.
Mouse   117 LGPEEG----QWGGPSKLDSD------------------EDSTDTTQSSEDSTSQENSAQDTPSD 159

  Fly  1661 SKEEPSE------PSTGAPTKDEPAEP-------------------STDAPESDESKETPESEVP 1700
            ||:..||      |..|..|:|..:|.                   ..:..:||:.:.|......
Mouse   160 SKDHDSEDEADSRPEAGDSTQDSESEEQRVGGGSEGESSHGDGSEFDDEGMQSDDPESTRSDRGH 224

  Fly  1701 TTVAPAGEKIPTSSITPDEEPTATSAPVAKPDEDVEKETSTEIPTDAPASSEEDENSSTDQIPSE 1765
            ..::.||  |.:.....|.|||:|                          .:.|::.|.     |
Mouse   225 ARMSSAG--IRSEESKGDHEPTST--------------------------QDSDDSQSV-----E 256

  Fly  1766 VPEKKPETPAQTPEE---GDIVGATAAPTTSDEVPPVQRLPEEVLAEIPQPSTETGIKQQDETTA 1827
            ...:|....:...||   |::..:.:..|.||..                           |.||
Mouse   257 FSSRKSFRRSHVSEEDYRGELTDSNSRETQSDST---------------------------EDTA 294

  Fly  1828 APSIDRKEPYVTEIDEEATTVAPISEKDEKPTEEEKPVEQKPTGEEPSEEEEKEKPIEQDVSTEG 1892
            :....|.|                |::|   |.|.:..|..|.|::||.|..:|           
Mouse   295 SKEESRSE----------------SQED---TAESQSQEDSPEGQDPSSESSEE----------- 329

  Fly  1893 PVSTEASEAGSTESSEEVKPSTEGEVAEKPEDKQPSSTAQAPVETIPEISTELPAQDGDKPTSEA 1957
              :.|.|:..|:||.|.|...:.|:        .|.:|:||                ||:..||:
Mouse   330 --AGEPSQESSSESQEGVTSESRGD--------NPDNTSQA----------------GDQEDSES 368

  Fly  1958 PVDSDEDT--------SAPSDEKIPSVSGEEVEGPEVTTASPQAAEEDELKTPAESEPSSTDKVP 2014
               |:||:        |..::|:..|.|.|.:   .::..|.::|::.:    :.|:.....:..
Mouse   369 ---SEEDSLNTFSSSESQSTEEQADSESNESL---SLSEESQESAQDGD----SSSQEGLQSQSA 423

  Fly  2015 ETEYQKPEDETKADETPESVTQVSDVATSTSAPVAGGDIEKDEQATTASPEEEEEIKPTIAPAAE 2079
            .||.:..|.:::.|...|..:...|.:.|          :::..:|.::...||:|:|....|..
Mouse   424 STESRSQESQSEQDSRSEEDSDSQDSSRS----------KEESNSTGSASSSEEDIRPKNMEADS 478

  Fly  2080 ---IPQPSEKEPVDEQE 2093
               |......:|:.:|:
Mouse   479 RKLIVDAYHNKPIGDQD 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tncNP_001247300.1 VWC 235..296 CDD:214564
PHA02664 <433..595 CDD:177447
Ehrlichia_rpt 529..1065 CDD:118064
DUF863 <1684..>1788 CDD:283539 18/106 (17%)
VWC 2762..>2805 CDD:302663
Dmp1NP_001345942.1 DMP1 1..503 CDD:311295 134/667 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..503 133/664 (20%)
Cell attachment site. /evidence=ECO:0000255 350..352 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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