DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tnc and LEO1

DIOPT Version :9

Sequence 1:NP_001247300.1 Gene:tnc / 42990 FlyBaseID:FBgn0039257 Length:2819 Species:Drosophila melanogaster
Sequence 2:NP_001310832.1 Gene:LEO1 / 123169 HGNCID:30401 Length:688 Species:Homo sapiens


Alignment Length:836 Identity:166/836 - (19%)
Similarity:298/836 - (35%) Gaps:226/836 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1409 DLDKKPE-EDSTKGTEAPESDKVPEVPTSASTENEIEESDKFTTVAPPKISASDETEPTAEE--- 1469
            |.|.:.| :||..|::: :||:......|.::.:|.::.::           .|..:|:.:|   
Human    11 DADSEAERKDSDSGSDS-DSDQENAASGSNASGSESDQDER-----------GDSGQPSNKELFG 63

  Fly  1470 DLVPATFEPIESEFEVSTKKPAVQGPPLPTLAPAQPEKKPVDAETSTEADISTEPSAEVEKEASG 1534
            |         :||.|         |....:.:....|:....:|.|..:|......::|::.:..
Human    64 D---------DSEDE---------GASHHSGSDNHSERSDNRSEASERSDHEDNDPSDVDQHSGS 110

  Fly  1535 ETSESDNE----IDAGASSTPVPVS----ADEDKTPSTEKTVEADDKFTTVAPLAGDEEE----S 1587
            |....|.:    .|.|:..:....|    :|::|....:|:.::||:...    ..|:||    |
Human   111 EAPNDDEDEGHRSDGGSHHSEAEGSEKAHSDDEKWGREDKSDQSDDEKIQ----NSDDEERAQGS 171

  Fly  1588 NLPKLPQDIFEEEAPVAVTTAAPSKDDGEQKPVEVEEKPIEDGQKPI-EDETSTPTSSENEIEPE 1651
            :..||.....:|:.........|...|.|::.:..|||...|.::|: .|......:|::|.:|:
Human   172 DEDKLQNSDDDEKMQNTDDEERPQLSDDERQQLSEEEKANSDDERPVASDNDDEKQNSDDEEQPQ 236

  Fly  1652 SDRATTIAPSKEEPSEPSTGAPTKDEPAEPSTDAPESDESKETPE-SEVPTTVAPAGEKIPTSSI 1715
            ......:..|.:|..:.|      ||....|.|..|.|...|:.. |:....|.....|...:| 
Human   237 LSDEEKMQNSDDERPQAS------DEEHRHSDDEEEQDHKSESARGSDSEDEVLRMKRKNAIAS- 294

  Fly  1716 TPDEEPTATSAPVAKPDEDVEKETSTEIPTDAPASSE-----EDENSSTDQIPSEVPEKKPETPA 1775
                              |.|.::.||:|.|...:.:     :|.:|.:|      .|.||.||.
Human   295 ------------------DSEADSDTEVPKDNSGTMDLFGGADDISSGSD------GEDKPPTPG 335

  Fly  1776 QTPEEGDIVGATAAPTTSDEVPPVQRLPEEVLAEIPQPSTETGIKQQDETTAAPSIDRKEPYVTE 1840
            |..:|..:      |....|..|:.....||  |||:.:|:.|               .:.|..:
Human   336 QPVDENGL------PQDQQEEEPIPETRIEV--EIPKVNTDLG---------------NDLYFVK 377

  Fly  1841 IDEEATTVAPISEKDEKPTEEEKPVEQKPTGEEPSEEE-EKEKPIEQDVSTEGPVSTEASEAGST 1904
            :....:                  ||.:|...:..|:| |.|:.::::..|...:..|.:.....
Human   378 LPNFLS------------------VEPRPFDPQYYEDEFEDEEMLDEEGRTRLKLKVENTIRWRI 424

  Fly  1905 ESSEEVKPSTEGEVAEKPEDKQPSSTAQAPVETIPEISTELPAQDGDKPTSEAPVDSDEDTSAPS 1969
            ...||     ..|:.|        |.|:....:...:|..|..:..|  ..:||:..|.:     
Human   425 RRDEE-----GNEIKE--------SNARIVKWSDGSMSLHLGNEVFD--VYKAPLQGDHN----- 469

  Fly  1970 DEKIPSVSGEEVEGPEVTTASPQAAEEDELKTPAESEPSSTDKVPETEYQKPEDETKADETPESV 2034
              .:....|..::|..|            .||.....|.|||..                |...:
Human   470 --HLFIRQGTGLQGQAV------------FKTKLTFRPHSTDSA----------------THRKM 504

  Fly  2035 T-QVSDVATSTS----APVAGGDIEKDEQATTASPEEEEEIKPTIAPAAEIPQPSEKEPVDEQEV 2094
            | .::|..:.|.    .|:||.|.|.  |.|....:|||.::      |.|.:.|::..:.|::.
Human   505 TLSLADRCSKTQKIRILPMAGRDPEC--QRTEMIKKEEERLR------ASIRRESQQRRMREKQH 561

  Fly  2095 ESGTKATPAESDGQPIDEIAPATSGPIDEASTAAPTK--------EESTTVASAASPAVHDDEIK 2151
            :.|..|:..|.|....:|..       :|:.:.|..|        ||...:.|:.|     ||..
Human   562 QRGLSASYLEPDRYDEEEEG-------EESISLAAIKNRYKGGIREERARIYSSDS-----DEGS 614

  Fly  2152 DVTTTQPVADEKEVAAPQDETKTSIDVSTDSPTAQDDEKQDKTEAPVAPTTVSSPT 2207
            :....|.:...|::.:.::..|      .:.|..::..:|.|.|       ||.||
Human   615 EEDKAQRLLKAKKLTSDEESGK------RERPKLKETWRQWKGE-------VSRPT 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tncNP_001247300.1 VWC 235..296 CDD:214564
PHA02664 <433..595 CDD:177447
Ehrlichia_rpt 529..1065 CDD:118064
DUF863 <1684..>1788 CDD:283539 24/109 (22%)
VWC 2762..>2805 CDD:302663
LEO1NP_001310832.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..357 85/416 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 547..583 8/42 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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