DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AFF1 and GCR1

DIOPT Version :10

Sequence 1:NP_001160165.1 Gene:AFF1 / 4299 HGNCID:7135 Length:1218 Species:Homo sapiens
Sequence 2:NP_015250.1 Gene:GCR1 / 856030 SGDID:S000005996 Length:785 Species:Saccharomyces cerevisiae


Alignment Length:664 Identity:133/664 - (20%)
Similarity:227/664 - (34%) Gaps:176/664 - (26%)


- Green bases have known domain annotations that are detailed below.


Human   284 PSLPSKSVAMQQKPTAYVRPMDGQDQAPSESPELKPLPEDYRQQTFEKT----DLKVPAKAKLTK 344
            |.|.|..:::...|..|:     |:|.|:.:..:|.    .|.||||.:    ||..|   .|:.
Yeast   105 PLLDSNFISLNSNPLLYI-----QNQNPNSNSSVKV----SRSQTFEPSKELIDLVFP---WLSY 157

Human   345 LKMPSQSVEQTYSNEVHCVEEILKEM----------THSWPPPLTAIHT------PSTAEPSKF- 392
            ||.....:::| :.:::.:.|:.:.|          ....|..|..|.|      |...:..:| 
Yeast   158 LKQDMLLIDRT-NYKLYSLCELFEFMGRVAIQDLRYLSQHPLLLPNIVTFISKFIPELFQNEEFK 221

Human   393 ---PFPTKDSQHVSSVTQNQKQY------DTSSKTHSNSQQGTSSMLEDDLQLSDSEDSDSEQTP 448
               .....::..:::||..:.|:      :.|.|..|...:.:..:..::::||      .|.|.
Yeast   222 GIGSIKNSNNNALNNVTGIETQFLNPSTEEVSQKVDSYFMELSKKLTTENIRLS------QEITQ 280

Human   449 EKPPSSSAPPSAPQSL---PEPVASAHSSSAESESTSDSDSSSDSESESSSSDSEENEPLETPAP 510
            .|...:|......|.|   .:.::...:..::||:...|........:.:|.:|.          
Yeast   281 LKADMNSVGNVCNQILLLQRQLLSGNQAIGSKSENIVSSTGGGILILDKNSINSN---------- 335

Human   511 EPEPPTTNKWQLDNWLTKVSQPAAPPEGPRSTEPPRRHPESKGSSDSATSQEHSESKDP----PP 571
                      .|.|.:..:....:.|.|...|.  :|.|  ||.|.:.....:|.:..|    |.
Yeast   336 ----------VLSNLVQSIDPNHSKPNGQAQTH--QRGP--KGQSHAQVQSTNSPALAPINMFPS 386

Human   572 KSSSKAPRAPPEAPHPGKRSCQKSPAQQEPPQRQTVGTKQPKKPVKASARAGSRTSLQGEREPGL 636
            .|:|..|.....||.|           |:..|::    |.|.....|||..||..|   ....|.
Yeast   387 LSNSIQPMLGTLAPQP-----------QDIVQKR----KLPLPGSIASAATGSPFS---PSPVGE 433

Human   637 LPYGSR---------DQTSKDKPKVKTKGRPRAAASNEPKPAVPPSSEKKKHKSSLPAPSKALSG 692
            .||..|         .||:.|....|:...||...|.....||..|.                  
Yeast   434 SPYSKRFKLDDKPTPSQTALDSLLTKSISSPRLPLSTLANTAVTESF------------------ 480

Human   693 PEPAKDNVEDRTPEHFALVPLTESQGPPH---SGSGSRTSGCRQAVVVQEDSRKDRLPLPLRDTK 754
                      |:|:.|        |..|.   .||.|.|:        :.:|:|.....|...:|
Yeast   481 ----------RSPQQF--------QHSPDFVVGGSSSSTT--------ENNSKKVNEDSPSSSSK 519

Human   755 LLSPLRDTPPPQSLMVKITLDLLSRIPQPPGKGSRQRKAEDKQPPAGKK----HSSEKRSSDSSS 815
            |....|   .|.:       |..:.:|:.|.:.:......:|.|.:.|.    :|.|.:..:.:.
Yeast   520 LAERPR---LPNN-------DSTTSMPESPTEVAGDDVDREKPPESSKSEPNDNSPESKDPEKNG 574

Human   816 KLAKKRKGEAERDCDNKKIRLEKEIKSQSSSSSSSHKESSKTKPSRPSSQSSKKEMLPPPPVSSS 880
            |.:.....:|::......|.       .|:.:::|....:||.||.|.| |||.|::......:.
Yeast   575 KNSNPLGTDADKPVPISNIH-------NSTEAANSSGTVTKTAPSFPQS-SSKFEIINKKDTKAG 631

Human   881 SQKPAKPALKRSRR 894
            ..:..|..|.|..:
Yeast   632 PNEAIKYKLSRENK 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AFF1NP_001160165.1 AF-4 15..527 CDD:461550 50/275 (18%)
PHA03247 <533..800 CDD:223021 62/282 (22%)
AF-4_C 957..1218 CDD:465894
GCR1NP_015250.1 PHA03307 362..>616 CDD:223039 71/334 (21%)
GCR1_C 638..730 CDD:432628 2/8 (25%)
Blue background indicates that the domain is not in the aligned region.

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