DRSC/TRiP Functional Genomics Resources

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Protein Alignment AFF1 and HOT1

DIOPT Version :10

Sequence 1:NP_001160165.1 Gene:AFF1 / 4299 HGNCID:7135 Length:1218 Species:Homo sapiens
Sequence 2:NP_013895.1 Gene:HOT1 / 855208 SGDID:S000004783 Length:719 Species:Saccharomyces cerevisiae


Alignment Length:796 Identity:155/796 - (19%)
Similarity:254/796 - (31%) Gaps:229/796 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   393 PFPTKDSQHVSSVTQNQK---QYDTSSKTH------SNSQQGT-SSMLEDDLQLSDSEDSDSEQT 447
            |...||...::|......   ..|.|..||      |.|..|: :|.|.:|   .::.|....:|
Yeast    39 PTTLKDGYRMNSQVNEDAIGINLDLSLPTHISPTTGSESASGSNASTLRND---GNALDGGLLRT 100

Human   448 PEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDSSSDSE--------SESSSSDSEENE- 503
                   ||..|||....:|..:.....:..|..:.:.|:|:|.        |:|.::||..|| 
Yeast   101 -------SAAISAPTGTSQPTETIGEKLSNEERVNSNVSASNSTTAGTGRMLSQSLTNDSPSNEI 158

Human   504 --------------------------PLETPAPEPEPPTTNKWQLDNW---------LTKVSQPA 533
                                      .|.....|......|..| ||:         |..|:||:
Yeast   159 STDQLKIFQRMDEMSARMIEMEESFNKLSNKIAEQNTMVLNLKQ-DNYKVMNKLNILLKLVAQPS 222

Human   534 APP-------------------------EGPRSTEPPRRHPESKGSSDSATS---QEHSESKDPP 570
            |.|                         :..::....|:|.....:.||.|.   .:|..:....
Yeast   223 ARPSTNNAQNKLAIELLNSISAVSSAYLQKMQNNGSGRQHTADLCTGDSNTHSGINQHRTTNGTI 287

Human   571 PKSSSKAP----------RAPPEAPHPGKRSCQKSPAQQEPPQRQ---TVGTKQPKKPVKASARA 622
            ..:::.|.          ...|:..|  .|:.......|..|.||   .:.|:..:...:.... 
Yeast   288 DVNTNTAQLNNQFSNALNTILPDQQH--NRNNVSQNINQSLPNRQLGPVINTQANQNQSQVLIH- 349

Human   623 GSRTSLQGEREPGLLPYGSRDQTSKDKPKVKTKGRPRAAASNEPKPAVPPSSEKKKHKSSLPAPS 687
            .:.|..|..|.|...|..|.|:..|..|. ..|.|.|...||.       ::....|.|:...|.
Yeast   350 NTNTHQQVNRSPISFPNASTDKPFKLNPN-GIKRRRRNTQSNN-------NASTNDHASAAQKPI 406

Human   688 KALSGPEPAKDNVEDRTPEHFALVPLTESQGPPHSGSGSRTSGCRQAVVVQEDSRKDRLPLPLRD 752
            .|||          ..|..|.:...:..:....|||..|.::.......:........|.||   
Yeast   407 SALS----------PLTNSHNSTTSMNYTNSSIHSGVTSASNSFHDLNSLNNFGTTTALSLP--- 458

Human   753 TKLLSPLRDTPPPQSLMVKITLDLLSRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDS-SSK 816
             .|.......||.|:::             ||...:.|      ||.:    .|:..:.|| :|:
Yeast   459 -SLALDNASFPPNQNVI-------------PPIINNTQ------QPLS----FSQLINQDSTTSE 499

Human   817 LAKKRKGEAERDCDNKKIRLEKEIKSQSSSSSSSHKESSKTKPSRPSSQSSKKEMLPPPPVSSSS 881
            |....|.....:..|                    :..:.|.||.|...:.|..:..........
Yeast   500 LLPSGKSGVNTNIVN--------------------RNRASTLPSYPKPMTVKSNVDDDGYQEDDD 544

Human   882 QKPAKPALKRSRREADTCGQDPPKSASSTKSNHKDSSIPKQRR-VEGKGSRSSSEHKGSSGDTAN 945
            .........|...|..|..:|  :.....:::.|::||.|:|| :..|.|.|.:..:...|::| 
Yeast   545 DDGDDEGDGRDNEEDSTAEED--EVDDEIETDMKNASINKRRRSLHHKKSNSLNGRRKLHGESA- 606

Human   946 PFPVPSLPNGNSKPGKPQVKFDKQQADLHMR------EAKKMKQKAELMTDRVGK-AFKYLEAVL 1003
                 :.||.||              |||.|      :.|.:.:  |..|...|| :.|:|||..
Yeast   607 -----TKPNINS--------------DLHYRILKAPTDVKTIWE--EYDTGIRGKPSIKHLEAKY 650

Human  1004 SFIECGIATESESQSSKSAYSVYSETVDLIKFIMSLKSFSDATAPTQEKIFAVLCMRCQSILNMA 1068
            .         ::.:.:|:. ..:|....|.|||:   :..:.....||.|        :::.|..
Yeast   651 G---------NKWRLNKNK-KTFSRRKRLYKFIL---NGMERGKTAQEMI--------ETLENKR 694

Human  1069 MFRCKKDIAIKYSRTL 1084
            :::..:|..:| .||:
Yeast   695 LYKDDEDGEVK-KRTI 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AFF1NP_001160165.1 AF-4 15..527 CDD:461550 38/187 (20%)
PHA03247 <533..800 CDD:223021 55/307 (18%)
AF-4_C 957..1218 CDD:465894 28/135 (21%)
HOT1NP_013895.1 ROM1 242..>437 CDD:227709 41/215 (19%)
GCR1_C 617..694 CDD:432628 20/99 (20%)

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