DRSC/TRiP Functional Genomics Resources

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Protein Alignment AFF1 and AIM3

DIOPT Version :10

Sequence 1:NP_001160165.1 Gene:AFF1 / 4299 HGNCID:7135 Length:1218 Species:Homo sapiens
Sequence 2:NP_009666.3 Gene:AIM3 / 852405 SGDID:S000000312 Length:947 Species:Saccharomyces cerevisiae


Alignment Length:1002 Identity:205/1002 - (20%)
Similarity:322/1002 - (32%) Gaps:306/1002 - (30%)


- Green bases have known domain annotations that are detailed below.


Human   155 AKSCGPPDSQHLTQDRLGQEGFGSSHHKKGDRRADGDHCASVTDSAPERELSPLISLPS----PV 215
            ||:......:|....:..:|      .|.|.:.:..:...|..:...||:.:.:.||..    |.
Yeast    30 AKTGYKASKKHYNNSKARRE------RKSGKKNSSDEEYDSEDEMEYERKPTDIRSLKDPKSFPP 88

Human   216 PPLSP-----IHSNQQTLPRTQGSSKVHGSSNNSKGYCPAKSPKDLAVKVHDKETPQDSL----- 270
            |||.|     ....||.:|..|.|....|:.....|  ...:.:....:....:.||..|     
Yeast    89 PPLKPGQKTYTGQQQQQMPNGQASYAFQGAYQGQPG--AGSTEQSQYAQPQYNQYPQQQLQQGVM 151

Human   271 ---------VAPAQPP--SQTFPPPSLPSKSVAMQQKPTAYVRPMDGQDQAPSESPELKPLPEDY 324
                     |.|.|||  .:..||....|.:.:.|..|.        |:|..:..|....|....
Yeast   152 PQQQQLQQGVVPQQPPIYGEQVPPYGSNSNATSYQSLPQ--------QNQPQNAIPSQVSLNSAS 208

Human   325 RQQT-FEKTDLKVPAKAKLTKLKMPSQSVEQTYSNEVHCVEEILKEMTHSWPPPLTAIHTPSTAE 388
            :|.| |...:|:..     |:...|:.|  .::.|.:.|.::           |....|..:...
Yeast   209 QQSTGFVSQNLQYG-----TQSSNPAPS--PSFQNGLQCHQQ-----------PQYVSHGSTNLG 255

Human   389 PSKFPFPTKDSQHVSSVTQNQKQYDTSSKTHSNSQQGTSSMLEDDLQLSDSEDSDSEQTPEKPPS 453
            .|:||    ..|.....||..:|...|.......|||                     .|..||.
Yeast   256 QSQFP----SGQQQQPTTQFGQQVLPSPAQPQQQQQG---------------------QPLPPPR 295

Human   454 SSAPPSAPQSLPEPVASAHSSSAESESTSDSDSSSDS----------------------ESESSS 496
            ......||   .||:::......:.:.......:.::                      ::.||:
Yeast   296 GQVILPAP---GEPLSNGFGQQQQQQQQQQQPLNQNNALLPQMNVEGVSGMAAVQPVYGQAMSST 357

Human   497 SDSEENEPLETPAP-EPEPPTTNKWQLDNWLTKVSQPAAP----PEGPRSTEPPRRHPESKGSSD 556
            ::.:::.|....:| :.:||..            .||..|    |:.|:..:....:| .:.|.|
Yeast   358 TNMQDSNPSYGASPMQGQPPVG------------GQPPVPVRMQPQPPQPMQQGNIYP-IEPSLD 409

Human   557 SATSQEHSE-----SKDPPPKSSSKAPRA-----PPEAPHPGKRSCQKSPAQQEPPQRQTVGTKQ 611
            |..|..|.|     ...|.||.....|..     ||...|..:.:.    ..|||...   |..|
Yeast   410 STGSTPHFEVTPFDPDAPAPKPKIDIPTVDVSSLPPPPTHRDRGAV----VHQEPAPS---GKIQ 467

Human   612 PKKPVKAS---ARAGSRTSLQGEREPGLLPYGSRDQTSKDKPKVKTKGRPRAAASNEPKPAVPPS 673
            |.....|:   |:....|:...||..|      ..:..:...|....|......:     .:||.
Yeast   468 PNTTSSAASLPAKHSRTTTADNERNSG------NKENDESTSKSSILGHYDVDVN-----IMPPP 521

Human   674 SEKKKHKSSLPAPSKALSGPE------PAKDNVEDRTPEHFALVPLTESQGPPHSGSGSRTSG-- 730
            ...:....|:|:.....:.||      |.::||              |...||..|:..||..  
Yeast   522 KPFRHGLDSVPSEHTTKNAPERAVPILPPRNNV--------------EPPPPPSRGNFERTESVL 572

Human   731 CRQAVVVQEDSRKDRLPLPLRDTKLLSPLRDTPPPQ-----SLMVKITLDLL------------- 777
            ...|..||||...:.||.|       .|.|.|...|     :..|::..::|             
Yeast   573 STNAANVQEDPISNFLPPP-------KPFRHTETKQNQNSKASPVEMKGEVLPGHPSEEDRNVEP 630

Human   778 SRIPQ-PPGKGSRQRKA-------EDKQPPAGK-KHSSEKRSSDSS--------------SKLAK 819
            |.:|| .|...|:.|:|       ::.|||... :.|....|||||              .::||
Yeast   631 SLVPQSKPQSQSQFRRAHMETQPIQNFQPPPKPFRRSQSSNSSDSSYTIDGPEANHGRGRGRIAK 695

Human   820 KRKGE-----AERDCDNKKI-------------------RLEKEIKSQSSSSSSSHKESSKTKPS 860
            ...|:     :|...:|.::                   |.||..:...:|...|.|:::|.:.|
Yeast   696 HHDGDEYNPKSENSTENGRLGDAPNSFIRKRAPTPPAPSRSEKLHEGTITSEVDSSKDANKYEKS 760

Human   861 RP-------SSQSSKKEMLPPPPVSSSSQKPAKPALKRSR------READTCGQDPPKSASSTKS 912
            .|       :.||:||   .||||  ...||...:||.:.      |||  .|||...::.:.:.
Yeast   761 IPPVTSSIQAQQSTKK---APPPV--VKPKPRNFSLKANEYPKELTREA--TGQDEVLNSITNEL 818

Human   913 NH-------------------KDSS-IPKQRRVEGKGSRSSSEHKGSSGDTANPFPVPSLPNGNS 957
            :|                   |||| :|         |....::..:||....|.|.||    .|
Yeast   819 SHIKLRKTNVNLEKLGGSKKVKDSSPVP---------SDLDEKYVSASGSITPPRPPPS----RS 870

Human   958 KPGKPQVKFDKQQADLHMREAKKMKQK 984
            .|.|......|:..:|..:.....|:|
Yeast   871 SPKKVPPVVPKKNDNLKKKPPVVPKKK 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AFF1NP_001160165.1 AF-4 15..527 CDD:461550 75/420 (18%)
PHA03247 <533..800 CDD:223021 69/317 (22%)
AF-4_C 957..1218 CDD:465894 7/28 (25%)
AIM3NP_009666.3 AIM3 8..99 CDD:407240 16/74 (22%)

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