DRSC/TRiP Functional Genomics Resources

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Protein Alignment mah and LHT2

DIOPT Version :10

Sequence 1:NP_651316.1 Gene:mah / 42988 FlyBaseID:FBgn0285912 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_564217.1 Gene:LHT2 / 839057 AraportID:AT1G24400 Length:441 Species:Arabidopsis thaliana


Alignment Length:373 Identity:82/373 - (21%)
Similarity:157/373 - (42%) Gaps:51/373 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VTLPALLVKLGYF-GILLVLSIIILQIYTSFLLSQCWTMAELLDPSIQQKRNYPYAALAELAYGP 147
            ::||..:..||:. |:.:::...|:.:||      .|.|.|:.: .:..||...|..|.:.|:|.
plant    50 LSLPYAMSNLGWGPGVTIMVMSWIITLYT------LWQMVEMHE-IVPGKRLDRYHELGQHAFGE 107

  Fly   148 YMSLLVSVLLDLSI-FAMAVPSVVMAAQNLEGVVLRMSAGQYNFSYCYWAII---VGLVICPLMW 208
            .:.|.:.|...|.: ..:.:..:|....:|:.|...:..........:|.:|   |..||     
plant   108 KLGLWIVVPQQLIVEVGVDIVYMVTGGASLKKVHQLVCPDCKEIRTTFWIMIFASVHFVI----- 167

  Fly   209 LGSPKHMRGLAIIAVCVMIVIVALLWFCLFAAPAIGTPFEGI----------SLELPGFLTVLNS 263
                .|:.....|::..:...|..|.:...|..|  :..:|:          |.::......||:
plant   168 ----SHLPNFNSISIISLAAAVMSLTYSTIAWAA--SVHKGVHPDVDYSPRASTDVGKVFNFLNA 226

  Fly   264 YSILAFQFDIHPVLLTLQIDMKQKSQV-----SWAALIGIAITCSVAIFG-SIIAAYKFGSMIAD 322
            ...:||.:..|.|:|.:|..:....::     .|..:|...|..::..|. :.:..|.||:.:.|
plant   227 LGDVAFAYAGHNVVLEIQATIPSTPEMPSKVPMWRGVIVAYIVVAICYFPVAFLGYYIFGNSVDD 291

  Fly   323 NLLQSLPTSVPFYVMLILMA-----LQLCFSVTVASSAMFMQIENYF--KLPESLSFK-RMLIRS 379
            |:|.:|...    :.||.||     :.:..|..:.:..:|..:|...  |:..:.||| |.:.||
plant   292 NILITLEKP----IWLIAMANMFVVIHVIGSYQIFAMPVFDMLETVLVKKMNFNPSFKLRFITRS 352

  Fly   380 SVLALEVLVAEFVPSFDALMDVVGGTITGPLVFILPPLLYRRIRRMER 427
            ..:|..::||..||.|..|:...||....|..:.||.:::..:::.:|
plant   353 LYVAFTMIVAICVPFFGGLLGFFGGFAFAPTTYYLPCIMWLVLKKPKR 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mahNP_651316.1 SLC5-6-like_sbd 110..426 CDD:444915 75/343 (22%)
LHT2NP_564217.1 Aa_trans 29..425 CDD:279788 82/373 (22%)

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