DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mah and Slc32a1

DIOPT Version :9

Sequence 1:NP_651316.1 Gene:mah / 42988 FlyBaseID:FBgn0285912 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_113970.1 Gene:Slc32a1 / 83612 RGDID:621402 Length:525 Species:Rattus norvegicus


Alignment Length:443 Identity:99/443 - (22%)
Similarity:177/443 - (39%) Gaps:87/443 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PPVQ-----------LTPSHQHDQLPFLRRSRFSALPHFRAYEDEPE--------NLSLFIAILY 73
            |||:           |.||...||       ...|...|..: |:|:        |::..|..::
  Rat    77 PPVEGDIHYQRGGAPLPPSGSKDQ-------AVGAGGEFGGH-DKPKITAWEAGWNVTNAIQGMF 133

  Fly    74 VVDLFGIFPFVTLPALLVKLGYFGILLVLSIIILQIYTSFLLSQCWTMAELLDPSIQQKRNYPYA 138
            |:.         ||..::..||.|:.|::...::..||..:|..| ...|..|..:.:.|: .|.
  Rat   134 VLG---------LPYAILHGGYLGLFLIIFAAVVCCYTGKILIAC-LYEENEDGEVVRVRD-SYV 187

  Fly   139 ALAELAYGPYMSLL------VSVLLDLSIFAMAVPSVVMAAQNLEGVVLRMSAGQYN------FS 191
            |:|.....|....|      |:.:::|   .|.....|:.:.||          .||      .|
  Rat   188 AIANACCAPRFPTLGGRVVNVAQIIEL---VMTCILYVVVSGNL----------MYNSFPGLPVS 239

  Fly   192 YCYWAIIVGLVICPLMWLGSPKHMRGLAIIAVCVMIVI-VALLWFCLFAAPAIGTPFEGISLELP 255
            ...|:||...|:.|..:|.:.|.:...:::......|| :.::.:||  :.|....:|.:..   
  Rat   240 QKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYCL--SRARDWAWEKVKF--- 299

  Fly   256 GFLTVLN---SYSILAFQFDIHPVLLTLQIDMKQKSQ----VSWAALIGIAITCSVAIFGSIIAA 313
             ::.|..   |..|:.|.:.....|.:|:.:|:|.|:    ::|..:....:....|:...:..|
  Rat   300 -YIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWA 363

  Fly   314 YKFGSMIADNLLQSLPTSVP-FYVMLILMALQLCF--SVTVASSAMFMQIENYFKLPE------S 369
            .:...:|.|||..|:...|. |.|...|::..|.|  :|.|...::|.:....| .|.      .
  Rat   364 DETKEVITDNLPGSIRAVVNIFLVAKALLSYPLPFFAAVEVLEKSLFQEGSRAF-FPACYGGDGR 427

  Fly   370 LSFKRMLIRSSVLALEVLVAEFVPSFDALMDVVGGTITGPLVFILPPLLYRRI 422
            |....:.:|.:::...:|:|.:||.|..||.:.|......|.|:||.|.:.|:
  Rat   428 LKSWGLTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRL 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mahNP_651316.1 SLC5-6-like_sbd 110..426 CDD:294310 78/342 (23%)
Slc32a1NP_113970.1 Aa_trans 115..512 CDD:279788 87/397 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352537
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D570025at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100570
Panther 1 1.100 - - O PTHR48017
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.