DRSC/TRiP Functional Genomics Resources

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Protein Alignment mah and LHT1

DIOPT Version :9

Sequence 1:NP_651316.1 Gene:mah / 42988 FlyBaseID:FBgn0285912 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_851109.1 Gene:LHT1 / 834078 AraportID:AT5G40780 Length:446 Species:Arabidopsis thaliana


Alignment Length:378 Identity:83/378 - (21%)
Similarity:161/378 - (42%) Gaps:65/378 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 LPALLVKLGYF-GI-LLVLSIIILQIYTSFLLSQCWTMAELLDPSIQQKRNYPYAALAELAYGPY 148
            ||..:.:||:. || :||||.:| .:||      .|.|.|:.: .:..||...|..|.:.|:|..
plant    57 LPYAMSQLGWGPGIAVLVLSWVI-TLYT------LWQMVEMHE-MVPGKRFDRYHELGQHAFGEK 113

  Fly   149 MSLLVSVLLDLSI-FAMAVPSVVMAAQNLEGVVLRMSAGQYNFSYC---------YWAIIVGLVI 203
            :.|.:.|...|.: ..:.:..:|...::|:         :::...|         |:.:|...|.
plant   114 LGLYIVVPQQLIVEIGVCIVYMVTGGKSLK---------KFHELVCDDCKPIKLTYFIMIFASVH 169

  Fly   204 CPLMWLGSPKHMRGLAIIAVCVMIVIVALLWFCLFAAPAIGTPFEGISLELP-GFL------TVL 261
            ..|..|.:...:.|:::.|..:.:....:.|        ..:..:|:..::. |:.      ||.
plant   170 FVLSHLPNFNSISGVSLAAAVMSLSYSTIAW--------ASSASKGVQEDVQYGYKAKTTAGTVF 226

  Fly   262 NSYSIL---AFQFDIHPVLLTLQIDM-----KQKSQVSWAALIGIAITCSVAIFG-SIIAAYKFG 317
            |.:|.|   ||.:..|.|:|.:|..:     |......|..:|...|..::..|. :::..|.||
plant   227 NFFSGLGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWRGVIVAYIVVALCYFPVALVGYYIFG 291

  Fly   318 SMIADNLLQSLPTSVPFYVML---ILMALQLCFSVTVASSAMFMQIENYFKLPESLSFK-----R 374
            :.:.||:|.||  ..|.:::.   |.:.:.:..|..:.:..:|..:|..  |.:.|:|:     |
plant   292 NGVEDNILMSL--KKPAWLIATANIFVVIHVIGSYQIYAMPVFDMMETL--LVKKLNFRPTTTLR 352

  Fly   375 MLIRSSVLALEVLVAEFVPSFDALMDVVGGTITGPLVFILPPLLYRRIRRMER 427
            ..:|:..:|..:.|....|.|..|:...||....|..:.||.:::..|.:.::
plant   353 FFVRNFYVAATMFVGMTFPFFGGLLAFFGGFAFAPTTYFLPCVIWLAIYKPKK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mahNP_651316.1 SLC5-6-like_sbd 110..426 CDD:294310 72/349 (21%)
LHT1NP_851109.1 Aa_trans 34..430 CDD:279788 83/378 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D570025at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48017
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.890

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