DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mah and AT5G02180

DIOPT Version :9

Sequence 1:NP_651316.1 Gene:mah / 42988 FlyBaseID:FBgn0285912 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001331278.1 Gene:AT5G02180 / 831862 AraportID:AT5G02180 Length:550 Species:Arabidopsis thaliana


Alignment Length:526 Identity:107/526 - (20%)
Similarity:202/526 - (38%) Gaps:115/526 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SRAPSFALPKRRPPVQLTPSHQHDQLPFLRRSRFS------ALPHFRAYEDEPENLSLFIAILYV 74
            |.:.|.:.|....||   |..:...||...:|:..      .||       ||...|...::|..
plant   114 SLSSSSSKPLLSQPV---PDKEETILPVNPQSQLKLSVTDLPLP-------EPNLCSFSQSVLNG 168

  Fly    75 VDLFGIFPFVTLPALLVKLGYFGILLVLSIIILQIYTSFLLSQCWTMAELLDPSIQQKRNYPYAA 139
            .::......:|:|..:.:.|:.|:.::|...::..||..|:.:|...:    |.||     .|..
plant   169 TNVLCGLGLITMPYAIKESGWLGLPILLFFGVITCYTGVLMKRCLESS----PGIQ-----TYPD 224

  Fly   140 LAELAYGPYMSLLVSVLLDLSIFAMAVPSVVMAAQNLEG----VVLRMSAGQYNFSYCYWAIIVG 200
            :.:.|:|.....::|:||.:.::|..|..::|.:.||.|    |.|.:::|....|...:||:..
plant   225 IGQAAFGITGRFIISILLYVELYAACVEYIIMMSDNLSGLFPNVSLSIASGISLDSPQIFAILTT 289

  Fly   201 LVICPLMWLGSPKHMRGLAIIAVCVMIVIVALLWFCLFAAPAIGTPFEGISLELPGFLTVLN--- 262
            |::.|.:||   |.:..|:.::|..::..: ||..|||...|:    :||.....|.:..|:   
plant   290 LLVLPTVWL---KDLSLLSYLSVGGVLASI-LLGICLFWVGAV----DGIGFHATGRVFDLSNLP 346

  Fly   263 -SYSILAFQFDIHPVLLTLQIDMKQKSQVSWAALIGIAITCSVAIFGSIIAAY-KFGSMIADNLL 325
             :..|..|.:..|.|...:...||..|:.....:|..:. |:|......:..| .||..:.....
plant   347 VTIGIFGFGYSGHSVFPNIYSSMKDPSRFPLVLVICFSF-CTVLYIAVAVCGYTMFGEAVESQFT 410

  Fly   326 QSL-----PTSVPFYVMLILMALQLCFSVTVASSAMFMQIENYFKLPE------SLSFKRMLIRS 379
            .::     |:.|..:..:|....:...::|    .:.|.:|......:      |:.|:.||:.|
plant   411 LNMPKHFFPSKVAVWTAVITPMTKYALTIT----PIVMSLEELIPTAKMRSRGVSILFRTMLVTS 471

  Fly   380 SVLALEVLVAEFVPSFDALMDVVGGTITGPLVFILPPLLYRRIRRMERVHQRIAAEASYGSLPLD 444
            :     ::||..||.|..:..::|..:...:..|.|.|.|..|.:              |.|.  
plant   472 T-----LVVALSVPFFAIVAALIGSFLAMLVALIFPCLCYLSILK--------------GKLS-- 515

  Fly   445 LNYDPVDLEMEPLLVISPPTTPRGCWLRFVRLLHRLECDVSCTMAVLIFGLLATFLSTYLNIFSL 509
                                                ...:...:.:::||:::....||..|..|
plant   516 ------------------------------------NTQIGLCIFIIVFGVVSGCCGTYSAISRL 544

  Fly   510 ASLFTN 515
            |:..|:
plant   545 ANQMTD 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mahNP_651316.1 SLC5-6-like_sbd 110..426 CDD:294310 77/335 (23%)
AT5G02180NP_001331278.1 SLC5-6-like_sbd 160..542 CDD:320982 90/460 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D570025at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100570
Panther 1 1.100 - - O PTHR48017
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.