DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mah and Slc38a8

DIOPT Version :10

Sequence 1:NP_651316.1 Gene:mah / 42988 FlyBaseID:FBgn0285912 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001178938.1 Gene:Slc38a8 / 502208 RGDID:1560237 Length:432 Species:Rattus norvegicus


Alignment Length:368 Identity:71/368 - (19%)
Similarity:146/368 - (39%) Gaps:57/368 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 FPFV------TLPALLVKLGYFGILLVLSIIILQIYTSFLLSQCWTMAELLDPSIQQKRNYPYAA 139
            ||:.      .:|..||.|  ..::.::|.:::..|.:.:..|.                 .|..
  Rat    45 FPWAFYKAGGLVPTFLVAL--VSLVFLISGLVILGYAASVSGQT-----------------TYQG 90

  Fly   140 LAELAYGPYMSLLVSVLLDLSIFAMAVPSVVMAAQNLEGVV--LRMSAGQ--YNFSYCYWAIIVG 200
            :.....||.|..|.......::..::|..:.:....||.:.  |...|.|  |........:|..
  Rat    91 VVRELCGPAMGKLCEACFLTNLLMISVAFLRVIGDQLEKLCDSLLPDAPQPWYAAQSFTLPLISV 155

  Fly   201 LVICPLMWL---GSPKHMRGLAIIAVCVMIVIVALLWFCLFAAPAIGTPFEGISLELPGFLTVLN 262
            |||.||..|   ...::...|..:|.|.:.:::.:.:: |:....|..|  |..|....:.:|.:
  Rat   156 LVIFPLSALRDIALQEYTSILGTLAACYLALVITVQYY-LWPQGLIRQP--GPLLSPSPWTSVFS 217

  Fly   263 SYSILAFQFDIHPVLLTLQIDMKQKSQVSW--AALIGIAITCSVAIFGSIIAAYKFGSMIADNLL 325
            .:..:.|.|..|...:::...|:.:|...|  .:::.:...|.|.....:.....||:.::.::|
  Rat   218 VFPTICFGFQCHEAAVSIYCSMQNQSLPHWTLVSVLSLMACCLVYTLTGVYGFLTFGTEVSADIL 282

  Fly   326 QSLP-TSVPFYVMLILMALQLCFSVTVASSAMFM---QIENYFK------------LPESLSFKR 374
            .|.| ......|..:|.|:.:   |||....:|:   .:::::|            ...|..:.|
  Rat   283 MSYPGNDTAIIVARVLFAVSI---VTVYPIVLFLGRSVMQDFWKKSYWATQGSPVLADPSGPWVR 344

  Fly   375 MLIRSSVLALEVLVAEFVPSFDALMDVVGGTITGPLVFILPPL 417
            :.:....:|:.:.:|.|:|....::.|:|| ::...:||.|.|
  Rat   345 LPLTFLWVAVTLAMALFLPDLSEIIGVIGG-LSAFFIFIFPGL 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mahNP_651316.1 SLC5-6-like_sbd 110..426 CDD:444915 64/333 (19%)
Slc38a8NP_001178938.1 SLC5-6-like_sbd 29..386 CDD:444915 70/366 (19%)

Return to query results.
Submit another query.