DRSC/TRiP Functional Genomics Resources

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Protein Alignment mah and skat-1

DIOPT Version :9

Sequence 1:NP_651316.1 Gene:mah / 42988 FlyBaseID:FBgn0285912 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_498989.1 Gene:skat-1 / 176271 WormBaseID:WBGene00010307 Length:460 Species:Caenorhabditis elegans


Alignment Length:498 Identity:87/498 - (17%)
Similarity:165/498 - (33%) Gaps:171/498 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 KLGYFGILLVLSIII--LQIYTSFLLSQCWTMAELLDPSIQQKRNYPYAALAELAYGPYMSL--- 151
            |||...:..|:|.:|  |..|.:.:|.:  ....|...|.:...:|.:.|.....|.....|   
 Worm    63 KLGGLWVSFVMSFVIAGLNWYGNHILVR--ASQHLAKKSDRSALDYGHFAKKVCDYSDIRFLRNN 125

  Fly   152 ------LVSVLLDLSIFAMAVPSVVMAAQNLEGVVLRMSAGQYNFSYCYWAIIVGLVICPLMWLG 210
                  .|:|.:......|...:::..:.||..:|     |.:                    ||
 Worm   126 SKAVMYFVNVTILFYQLGMCSVAILFISDNLVNLV-----GDH--------------------LG 165

  Fly   211 SPKHMRGLAIIAVCVMIV----------------IVALLWFCLFAA----------------PAI 243
            ..:|.:.:.:..|.:..:                :|:.::|.:.||                || 
 Worm   166 GTRHQQMILMATVSLFFILLTNMFTEMRIVSFFALVSSVFFVIGAAVIMQYTVQQPNQWDKLPA- 229

  Fly   244 GTPFEGISLELPGFLTVLNSYSILAFQFDIHPVLLTLQIDMKQKSQVSWAALIGIAITCSVAIFG 308
            .|.|.|.       :|:: ..|:.||:..    .:.|.|:.|..:..::.|..|:..|..:....
 Worm   230 ATNFTGT-------ITMI-GMSMYAFEGQ----TMILPIENKLDNPAAFLAPFGVLSTTMIICTA 282

  Fly   309 SIIAAYKFG-SMIADNLLQSLPTSVP----FYVMLILMALQLCFSVTVASSAMFMQIENYFK--- 365
            .:.|...|| :...|::..::.|:||    :..:.:.:.||.....::|...::....|.|:   
 Worm   283 FMTALGFFGYTGFGDSIAPTITTNVPKEGLYSTVNVFLMLQSLLGNSIAMYVVYDMFFNGFRRKF 347

  Fly   366 ------LPESLSFKRMLIRSSVLALEVLVAEFVPSFDALMDVVGGTITGPLVFILPP-------- 416
                  :|:.||.|.  .|...:.:..|:|..:|..:.::.:||.|.......|.||        
 Worm   348 GARFPNVPKWLSDKG--FRVFWVLVTYLMAVLIPKLEIMIPLVGVTSGALCALIFPPFFEMITFW 410

  Fly   417 ------LLYRRIRRMERVHQRIAAEASYGSLPLDLNYDPVDLEMEPLLVISPPTTPRGCWLRFVR 475
                  |.||  :||.::                                            |:.
 Worm   411 TDWKGLLTYR--QRMTKI--------------------------------------------FIN 429

  Fly   476 LLHRLECDVSCTMAVLIFGLLATFLSTYLNIFSLASLFTNNSP 518
            |:         .||:.:|.::|   ..|.||.::...|:...|
 Worm   430 LV---------VMAIGVFAIIA---GVYTNIHAIIQSFSQPDP 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mahNP_651316.1 SLC5-6-like_sbd 110..426 CDD:294310 68/384 (18%)
skat-1NP_498989.1 Aa_trans 35..446 CDD:279788 82/482 (17%)
SdaC 40..448 CDD:223884 83/484 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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