DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and YVH1

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_012292.3 Gene:YVH1 / 854844 SGDID:S000001465 Length:364 Species:Saccharomyces cerevisiae


Alignment Length:401 Identity:97/401 - (24%)
Similarity:159/401 - (39%) Gaps:128/401 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 IDAEMLVILG--QMDAPTKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNFFPGTFEYF- 432
            :|.|:..|||  .:.....|.:|..||:|:|           :.|||:|.:     |....||. 
Yeast     8 VDEEVTRILGGIYLGGIRPIIDHRPLGAEFN-----------ITHILSVIK-----FQVIPEYLI 56

  Fly   433 -------NVRVYDDEKTNLLKYWDDTFRYIT-----------------RAKAEGSKVLVHCKMGV 473
                   |:.:.||:.|::|:|:|:|.|:|.                 :.|.:...|..||:.|:
Yeast    57 RKGYTLKNIPIDDDDVTDVLQYFDETNRFIDQCLFPNEVEYSPRLVDFKKKPQRGAVFAHCQAGL 121

  Fly   474 SRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQLETYSGM----LD---------A 525
            |||.:.::||.|..|......|:..||:::..::||:||:.||..:..|    :|         .
Yeast   122 SRSVTFIVAYLMYRYGLSLSMAMHAVKRKKPSVEPNENFMEQLHLFEKMGGDFVDFDNPAYKQWK 186

  Fly   526 MKNKEKLQRSKSE--TNLKSTKDARLLPGSEPTPLIQALNQA-KSKST-------------GEAG 574
            :|...||..|.||  :|....||      ||.:..:..|.:| |||.|             ..:.
Yeast   187 LKQSIKLDPSGSELVSNSGMFKD------SESSQDLDKLTEAEKSKVTAVRCKKCRTKLALSTSF 245

  Fly   575 VTPDGEEEDGSRMHRRSIAQKSQRRMVRRSSSTSPKTQTAVVTKQQSQS---------MENLTPE 630
            :..|...::.|..|....|..|.|                ::..|:||:         ::.:.||
Yeast   246 IAHDPPSKESSEGHFIKRAANSHR----------------IIDIQESQANCSHFFIEPLKWMQPE 294

  Fly   631 RSVAEEPKNMRF--PGSN----GENYSVTQNQVLHIQKHTPLS----VRTRIHDLEAHRADQLPQ 685
            ....:|.:. :|  ||.:    |.|:           |.:..|    |...|| |:..:.||.|.
Yeast   295 LQGKQELEG-KFSCPGCSSKVGGYNW-----------KGSRCSCGKWVIPAIH-LQTSKVDQFPL 346

  Fly   686 QPVWTSLTKLI 696
            |.  |:|..::
Yeast   347 QS--TALPNMV 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592 2/7 (29%)
DSP_slingshot 385..523 CDD:350363 45/166 (27%)
YVH1NP_012292.3 DSP_fungal_YVH1 12..173 CDD:350368 48/176 (27%)
Blue background indicates that the domain is not in the aligned region.

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