DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ssh and SDP1

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_012153.1 Gene:SDP1 / 854693 SGDID:S000001375 Length:209 Species:Saccharomyces cerevisiae


Alignment Length:144 Identity:43/144 - (29%)
Similarity:69/144 - (47%) Gaps:15/144 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 EHVYLGSEWNASNLEELQKNGVRHILNVTREIDNF---FPGTFEYFNVRVYDDEKTNLLKYWD-- 449
            |.:||.||   ..::||....|  ::||..|.::.   .|.. ||.:.|...|.:..|    |  
Yeast    66 EKIYLYSE---PTVKELLPFDV--VINVAEEANDLRMQVPAV-EYHHYRWEHDSQIAL----DLP 120

  Fly   450 DTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLN 514
            .....|..|..:..|:|:||:.|:||||:::|||.||.:....:.:.:.:|.|...|.|:...:.
Yeast   121 SLTSIIHAATTKREKILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIF 185

  Fly   515 QLETYSGMLDAMKN 528
            ||..:...|:|..|
Yeast   186 QLMEWEVALNAKTN 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 40/137 (29%)
SDP1NP_012153.1 DSP_fungal_SDP1-like 56..194 CDD:350371 40/137 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.