DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and AT4G18593

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_567561.1 Gene:AT4G18593 / 827592 AraportID:AT4G18593 Length:142 Species:Arabidopsis thaliana


Alignment Length:70 Identity:16/70 - (22%)
Similarity:27/70 - (38%) Gaps:15/70 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   849 IVGVGEGTVKRTKQKLEESTSLKKRCQEESQELLLEAVDAGQRRCPSLY----RSASSAHSPRQR 909
            ||.:.|..|.....|.||..:.|||           :.::.|.:|.|::    :...:.|.....
plant    35 IVAIEENIVPHEPGKGEECFAWKKR-----------SGNSEQVQCSSIFVEPMKWMQTIHDGMVE 88

  Fly   910 QPLRC 914
            :.|.|
plant    89 EKLLC 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363
AT4G18593NP_567561.1 None
Blue background indicates that the domain is not in the aligned region.

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