DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and EPM2A

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_005661.1 Gene:EPM2A / 7957 HGNCID:3413 Length:331 Species:Homo sapiens


Alignment Length:152 Identity:29/152 - (19%)
Similarity:55/152 - (36%) Gaps:37/152 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 TKIFEHVYLGS---EWNASNLEELQKNGVRHILNVTREID--------NFF-----PGTFEYFNV 434
            ::|..:::|||   :.....::...:.|:..::|...|.|        |.:     |.|.    :
Human   158 SRILPNIWLGSCPRQVEHVTIKLKHELGITAVMNFQTEWDIVQNSSGCNRYPEPMTPDTM----I 218

  Fly   435 RVYDDEKTNLLKYWDDTFRYITRAKAE---------------GSKVLVHCKMGVSRSASVVIAYA 484
            ::|.:|  .|...|..|....|..:.:               |..|.|||..||.||.:.|..:.
Human   219 KLYREE--GLAYIWMPTPDMSTEGRVQMLPQAVCLLHALLEKGHIVYVHCNAGVGRSTAAVCGWL 281

  Fly   485 MKAYQWEFQQALEHVKKRRSCI 506
            .....|..::....:..:|..:
Human   282 QYVMGWNLRKVQYFLMAKRPAV 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 29/152 (19%)
EPM2ANP_005661.1 CBM20_laforin 1..129 CDD:99881
DSP_laforin-like 155..312 CDD:350375 29/152 (19%)
Glucan phosphatase signature motif CXAGXGR. /evidence=ECO:0000305|PubMed:25544560, ECO:0000305|PubMed:26231210 266..272 3/5 (60%)
Blue background indicates that the domain is not in the aligned region.

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